Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0932 ATGCAACCAAGGGCAAGTACTGGAGACGGTTTCCGTTTTAGCGCATCTAGTACGCCTAGCATTTCAACTAGAGGATCTAATGCTGATGATATTGAGTCACAAGGTGATGTTTACATATGGGGAGAGGTTTTTACAGATGGATTACCTTCAAAGATAGATGTGTTGATCCCTAGGCTGTTAGAGTCAAATGTTGTTCTTGATGTTCGTAACATTGCATCCGGTGCGCATCACCTTGCTATAATAAACAGGAAAGGAGAGGTTTTTACTTGGGGAGAAGAATCTGGGGGAAGACTTGGTCATGGAATTGATAAAGATTTTGGTAAGCCTCATCTAGTTGAGTTTCTTGAAGATGTTACTTTGGATATTGTTGCATGCGGAGAGTTTCATACATGTGCTGTGTCTAAATCTGATGATTTTTTTACATGGGGCGATGGTACACATAATGTTGGACTTCTTGGACATGGTAATGAGGCAAGTCACTGGATACCAAAGACTGTCTTTGGCTTTTTGGATGGACTTCAAGTTGTATCTGTTGCATGTGGCACATGGCATTCAGCATTGACAACCTCAAATGGAAAATTGTTTACCTTTGGTGATGGAACATTTGGTGTTTTGGGCCATGGTGACGAAGAGAGTGTAATGTATCCAAAGGAAGTACAGTTATTAAGTGGACTCAAGACAATTAAGGTTGCTTGTGGAGTATGGCACACTGCAGCTATTGTCGACGTTGTTTTTCAATCTGGTTCAAATGTTTCATCATGGAAGCTTTTCACATGGGGTGACGGCGACAAATATCGTTTAGGCCACGGAAACAAAGATATGTACTTGAAACCGACACGTGTCTCACCCCTTATTGAATATAATTTCCAGCAGATAGCATGTGGACACACCATGACTGCTGCTCTCACTACATCTGGTCATGTATTTACAATGGGAAGCACGGAAAATGGTCAATTAGGAAATCCAAATTCTGCTGGAAAAGTACCTACTTTAGTTCAAGACAAGTTGCTTGGTGTATTCGTTGAGGAAATATCATGTGGAGCACATCATGTTGCTGCCGTGACATCAAGAAGTGAACTATATACATGGGGAAAAGGTTCTAATGGAAGGCTAGGACATGGTGACACAGATGATAGAAAATCTCCTACACTTGTGGTAGCCATGAAAGATAGGCATATAAAACATATCTCATGTGGTTCAAACTTTACATCTTGTATATGTAACCATAAATGGGTCACTGGAACTGACCAATCTGTTTGCTTTGGTTGTAAACAAGCATTCGGTTTAACAAGAATAAGACACAATTGTAAAAATTGTGGATTGGTTTTCTGTCATGCTTGTAGTTCTAAAAAGGCATTCAAAGCTGCAATGGCTCCAACATTAGAAAAACCACATCGTGTGTGTGATACTTGTTATACTAAGCTTAAAGTTGCTGATACCAATGATCCTTTAAAGGTTAATGGAGAAGCTGCTCCTTCGCATGGTTCCACAACTGTTAGGGAAAGAGTAGACCAAGGTATTTTAAGGTCTAAAAGAACCGTCTTCTCTTCTATTACTGAACCAGTGAAATACCTTGAAGTAAGGAATAATAAGCCTGGAACTGAATATGATTCTACTTCTTTTGTAAGAGCTTCTTTAGTTCCATCTCTTTTGCAATTGAAAGATATTGCATTTCCAAGTTCACTGAGTTCTATTCAAAGTATTTTGAAGCCTTATACACCCCCTAGTTCATCACAAAGTCCTACATTCCCACACACGAGTAGATCAAGCCCTTCTCCACCTTTTGTCAGTCCAAGATTTTCTGGTGGTATTGTCAATAGTTTGAGAAGGACTAATGATGTTCTGAACCAACGAGTCTCGAATTTGCAGAGCCAGATTCGAAGTTTGGAGCAGACAAGTGACGTGAAAGATGTGGAAATTCAGAAACTTCAGAGAAAGGCTACAGAAGCTATTGCCTGGGTTGCAGTGGAATCTTCTTGTCATAGAGAAGCAAAAGATTTTATTGAATCTACTAAACATCAGTTGAAGGAAATGACTGAGAAGCTACCAGTAGATATTCCAGAAAGTAATATCTTGAGTACTATCCAGACTCGAGCTGAAGATTTTCTAAAAGAGTTTTTGGAATCTGACAAATCAGAATTGGAGTCCAATCAACAAAATGCACATGACATATCTGCCGCAGATAACGACTCTTCTAAACTAGAAAATATCGGACTAGTAGAAAATGCTGACAATGTAGGAGTTGACGAATCAAAGTTAGAGTCTTTGCAACATAATGCAATTGATATATCTACCTCAAAAAGTGGCAATTTTGAACTACAAGATCATAGACTAGAAGAAAATGCTGATATTGTAGGAGTTGACCATTGTCAATATGAAGGAAATTTTGTTGAAGAAATTAATAAACCAATGTTGGAGTCTGAGCAACGTGATTCAACTGATATAGCTACATCCGATAGTGGAACTTCTAAACTGCAAGAACAGATACATGAAAAAATTGATGAGACTGCAAGAGCTGATCAATCTGAGGCTGGAATAAATGTTCGTCAAGAAAGTAATGGATCGTCTAAATTTAGTGTTGAAGAAGCGGTGTCACCCCAAAACTCCGAAAATAGTTCAATATCGCTGGACAGTTCAAGACATGAGAGACTGCCAGAAACACAATTCTTTGAAAAATTTGAGTCTGGTGTTTATGTGTTACTCATGCTACGGGCTGATGGAATCAAAATATTTCAAAGAGTTAAGTTCAGTAAACGAAGGTTCACTGAAAAACAAGCAGAAGAATGGTGGAGACAGAACAAAGGTAGGGTTCTTAGGAAATACTGTCAAGTACATCAAAATAATAATGGATCATGTGACATTACACCAAATGTTAAAGAAAATATTGACTCATAG 2895 0.3855 MQPRASTGDGFRFSASSTPSISTRGSNADDIESQGDVYIWGEVFTDGLPSKIDVLIPRLLESNVVLDVRNIASGAHHLAIINRKGEVFTWGEESGGRLGHGIDKDFGKPHLVEFLEDVTLDIVACGEFHTCAVSKSDDFFTWGDGTHNVGLLGHGNEASHWIPKTVFGFLDGLQVVSVACGTWHSALTTSNGKLFTFGDGTFGVLGHGDEESVMYPKEVQLLSGLKTIKVACGVWHTAAIVDVVFQSGSNVSSWKLFTWGDGDKYRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTAALTTSGHVFTMGSTENGQLGNPNSAGKVPTLVQDKLLGVFVEEISCGAHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVVAMKDRHIKHISCGSNFTSCICNHKWVTGTDQSVCFGCKQAFGLTRIRHNCKNCGLVFCHACSSKKAFKAAMAPTLEKPHRVCDTCYTKLKVADTNDPLKVNGEAAPSHGSTTVRERVDQGILRSKRTVFSSITEPVKYLEVRNNKPGTEYDSTSFVRASLVPSLLQLKDIAFPSSLSSIQSILKPYTPPSSSQSPTFPHTSRSSPSPPFVSPRFSGGIVNSLRRTNDVLNQRVSNLQSQIRSLEQTSDVKDVEIQKLQRKATEAIAWVAVESSCHREAKDFIESTKHQLKEMTEKLPVDIPESNILSTIQTRAEDFLKEFLESDKSELESNQQNAHDISAADNDSSKLENIGLVENADNVGVDESKLESLQHNAIDISTSKSGNFELQDHRLEENADIVGVDHCQYEGNFVEEINKPMLESEQRDSTDIATSDSGTSKLQEQIHEKIDETARADQSEAGINVRQESNGSSKFSVEEAVSPQNSENSSISLDSSRHERLPETQFFEKFESGVYVLLMLRADGIKIFQRVKFSKRRFTEKQAEEWWRQNKGRVLRKYCQVHQNNNGSCDITPNVKENIDS* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0932 964 MobiDBLite consensus disorder prediction 825 839 - -
Mal7g0932 964 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 805 947 - -
Mal7g0932 964 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 192 243 IPR000408 -
Mal7g0932 964 SUPERFAMILY FYVE/PHD zinc finger 410 476 IPR011011 -
Mal7g0932 964 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 1 834 - -
Mal7g0932 964 Pfam Transcription factor regulating root and shoot growth via Pin3 887 941 IPR013591 -
Mal7g0932 964 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 805 947 - -
Mal7g0932 964 Pfam Regulator of chromosome condensation (RCC1) repeat 140 186 IPR000408 -
Mal7g0932 964 Pfam Regulator of chromosome condensation (RCC1) repeat 84 133 IPR000408 -
Mal7g0932 964 Pfam Regulator of chromosome condensation (RCC1) repeat 305 354 IPR000408 -
Mal7g0932 964 Pfam Regulator of chromosome condensation (RCC1) repeat 191 240 IPR000408 -
Mal7g0932 964 Pfam Regulator of chromosome condensation (RCC1) repeat 256 302 IPR000408 -
Mal7g0932 964 Pfam Regulator of chromosome condensation (RCC1) repeat 359 406 IPR000408 -
Mal7g0932 964 SUPERFAMILY RCC1/BLIP-II 33 411 IPR009091 -
Mal7g0932 964 MobiDBLite consensus disorder prediction 710 729 - -
Mal7g0932 964 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 306 357 IPR000408 -
Mal7g0932 964 MobiDBLite consensus disorder prediction 803 881 - -
Mal7g0932 964 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 230 240 IPR000408 -
Mal7g0932 964 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 137 191 IPR000408 -
Mal7g0932 964 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 35 84 IPR000408 -
Mal7g0932 964 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 85 136 IPR000408 -
Mal7g0932 964 Gene3D - 12 252 IPR009091 -
Mal7g0932 964 ProSiteProfiles BRX domain profile. 887 942 IPR013591 -
Mal7g0932 964 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 414 476 IPR017455 -
Mal7g0932 964 PRINTS Chromosome condensation regulator RCC1 signature 137 153 IPR000408 -
Mal7g0932 964 PRINTS Chromosome condensation regulator RCC1 signature 178 194 IPR000408 -
Mal7g0932 964 PRINTS Chromosome condensation regulator RCC1 signature 87 103 IPR000408 -
Mal7g0932 964 PRINTS Chromosome condensation regulator RCC1 signature 295 313 IPR000408 -
Mal7g0932 964 PRINTS Chromosome condensation regulator RCC1 signature 353 374 IPR000408 -
Mal7g0932 964 PRINTS Chromosome condensation regulator RCC1 signature 194 208 IPR000408 -
Mal7g0932 964 MobiDBLite consensus disorder prediction 573 597 - -
Mal7g0932 964 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 412 485 IPR013083 -
Mal7g0932 964 Gene3D - 253 411 IPR009091 -
Mal7g0932 964 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 1 834 - -
Mal7g0932 964 MobiDBLite consensus disorder prediction 573 596 - -
Mal7g0932 964 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 254 305 IPR000408 -
Mal7g0932 964 Pfam FYVE zinc finger 410 475 IPR000306 GO:0046872
Mal7g0932 964 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 358 409 IPR000408 -
Mal7g0932 964 Coils Coil 605 646 - -
Mal7g0932 964 SMART fyve_4 408 477 IPR000306 GO:0046872
Mal7g0932 964 MobiDBLite consensus disorder prediction 843 875 - -
Mal7g0932 964 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0932 Mal-Chr7 25848278 25854609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0932 797 941 Major Intrinsic Protein MIP AT1G31880 27.273 8.88e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0932 - - mtr:MTR_4g029410 1430.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0932 7 25848278 25854609 Mal3g2392 3 94463740 94465187 PCT