Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0910 ATGAAAAGTCATCATCATCTTCTTCATGCTTCGTTTTCTTCTAATCATTCTAATAATTCTATCATACCCTTAAGCTCCAATCATCATCAATTACCAAAAACTATGGCAATATCACCTCAAACATTCCCAACAACTAAAAAACCACCATCAGAAACGACGTCGTTTATCTCCCCAAACCTTACTAACATTAACCTCCTCCACTCTCTTTTACACCTCACAAACCAAATATCTTCATTAAACGCAACTTCTTGGTGTCGTTTCCTCTTAAACAAACTATCCTCTTCCACCATCCGTAAAACGCACCTCCTCGGTGTCGTTTTCGATGACCTAATTCGCAATTCAGTTTCGGTTTCAAATTCGAATTCTTTCGTTCTTTGTCTCGAAGAAATGTATATTGTGCTTCATAGGATTAAAACCTTAATTGCAGATTGTTCCAATGGAAGCAAATTTTCGATTTTAATGCAAATTGAAACCGTTGCTGATAATTTCAACAAATTAACCGGTGAGTTATCTACACTTCTAGATGTTTTTCCAATTCAAGAGATGAACCTAAACGACGACGTTTTTGAGCTTATTCTTCTCATCAGAAAACAGTGTTCAGAAACGAAGAATTTGTTATGCGAAGAACAGATTAATCTCCGAAACGACGTCGTTTCTGTTCTAGAAGGAATCAAGAGAGAAATTGTTCCGAAAGAGGAAAAGCTAGCTTCGATTTTTGAGAAATTGGAGATTTGTGATTCTTCGAGTTGTAGAAGTGAGATTGAGAATCTACAAGAAGAGATTCAGAATCGAAATGAAGAACAATCGAAATCGGAGATTGTTGCTTTGATCGGACTCGTTCGTTACGCGAAGTGTGTTCTTTTTGGTGCGTCGACGCCGTCGACGGGAAATGATGGCCGCCTACAGCGGAATCAGTCGTTGGAGTTGGTGGTTCCGGCGGATTACCGGTGTCCGATAAGTCTTGAACTGATGCGGGATCCTGTCGTCGTGGCAACAGGACAGACGTACGATCGTGGCTCGATTAAGCTTTGGATTGAATCTGGACACAACACGTGTCCTAAAACAGGTCAAACCCTGGCCCACACGGAGTTAATACCTAACCATGCTTTGAGAAATATGATAGCTATTTGGTGCAAAGAACAGAAAATTCCGTTTGAGGGTGAAGCAGTTGCCGTTAAAGTTAACGGTGGAGTTATGAATAAGACGGCTTTGGAAGCAACTAGAATGACGGCGTCGTTTTTAGTCAACAAGTTGGCGTTGACTAACGGTTCTAATGTGTCAATGGAAGAGACAAACGGCGTGGTTTATGAGCTTCGGGTGTTGGCGAAAACAGACTCGGAGAGCCGAGCTTGTATAGCGGAAGCTGGAGCTATAGAGATTTTGGTTCGGTTTTTAAGCTATGAAGTTGGTTCACAAAACCCGAGTTTACAGGTTAATGCAGTGACAACGATATTAAATCTCTCGATACTTGAAGCGAATAAGACAAGGATAATGGAGACTGACGGCGCATTAAACGGTGTAGCGGAAGTTTTAAGATCGGGTGCCACGTGGGAGGCCAAAGCGAATGCGGCTGCAACGGTGTTTAGTTTAACGGGAGTGGTTGGGTTTAGGAAAAGGTTGGGTAGGAAGACACGTATTGTGAGTGGATTGATAGAGTTGGCAAAGTGTGGGCCTGAGGGAGCAAAGAGGGACGCGCTGGCAGCGATATTACATCTTGCAGCGGATAGGGAGACGGTGGCGAGGTTGGTAGAGAGTGGTGCGGTGGAGATGACAGCGGGGATTATGGCGGTGATGCCAGAGGAGGCGGTGACAATACTTGAAGCGGTGGTGAAGCGTGGAGGATTGGTGGCGGTTGCGGCGGCTTTTGTGGGGATAAAAAAATTGGGGACGGTGTTGAGGGAAGGATCAGAAAGGGCGAGGGAGAGTGCGGCATCGACACTTGTGACAATGTGTAGGAAAGGTGGATCGGAGATTGTGGCGGAGCTTGCGGCAATTCATGGTGTGGAGAGGGTGATTTGGGAGTTGATGGCGGTGGGAAGTGTGAGAGGGAGGAGGAAGGCAGCGACATTGTTGAGGATCTTACGGCGGTGGGCAGCGGGTTTGGATGGTGGTGAAACGGAAGGATTTTCATCAACGAACACTTTTGTTAGTACGTCAACTACCGTGGTTGTTCCAACTCCCACTTCATTAGCACAGTAA 2199 0.4497 MKSHHHLLHASFSSNHSNNSIIPLSSNHHQLPKTMAISPQTFPTTKKPPSETTSFISPNLTNINLLHSLLHLTNQISSLNATSWCRFLLNKLSSSTIRKTHLLGVVFDDLIRNSVSVSNSNSFVLCLEEMYIVLHRIKTLIADCSNGSKFSILMQIETVADNFNKLTGELSTLLDVFPIQEMNLNDDVFELILLIRKQCSETKNLLCEEQINLRNDVVSVLEGIKREIVPKEEKLASIFEKLEICDSSSCRSEIENLQEEIQNRNEEQSKSEIVALIGLVRYAKCVLFGASTPSTGNDGRLQRNQSLELVVPADYRCPISLELMRDPVVVATGQTYDRGSIKLWIESGHNTCPKTGQTLAHTELIPNHALRNMIAIWCKEQKIPFEGEAVAVKVNGGVMNKTALEATRMTASFLVNKLALTNGSNVSMEETNGVVYELRVLAKTDSESRACIAEAGAIEILVRFLSYEVGSQNPSLQVNAVTTILNLSILEANKTRIMETDGALNGVAEVLRSGATWEAKANAAATVFSLTGVVGFRKRLGRKTRIVSGLIELAKCGPEGAKRDALAAILHLAADRETVARLVESGAVEMTAGIMAVMPEEAVTILEAVVKRGGLVAVAAAFVGIKKLGTVLREGSERARESAASTLVTMCRKGGSEIVAELAAIHGVERVIWELMAVGSVRGRRKAATLLRILRRWAAGLDGGETEGFSSTNTFVSTSTTVVVPTPTSLAQ* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0910 732 ProSiteProfiles U-box domain profile. 310 384 IPR003613 GO:0004842|GO:0016567
Mal7g0910 732 SUPERFAMILY RING/U-box 308 384 - -
Mal7g0910 732 SMART Ubox_2 314 377 IPR003613 GO:0004842|GO:0016567
Mal7g0910 732 CDD RING-Ubox_PUB 315 357 IPR045210 -
Mal7g0910 732 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 296 387 IPR013083 -
Mal7g0910 732 Pfam Armadillo/beta-catenin-like repeat 445 488 IPR000225 GO:0005515
Mal7g0910 732 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 47 712 - -
Mal7g0910 732 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 456 502 IPR000225 GO:0005515
Mal7g0910 732 Coils Coil 247 274 - -
Mal7g0910 732 Gene3D - 412 623 IPR011989 -
Mal7g0910 732 PANTHER U BOX DOMAIN-CONTAINING 47 712 - -
Mal7g0910 732 SMART arm_5 445 489 IPR000225 GO:0005515
Mal7g0910 732 SUPERFAMILY ARM repeat 434 694 IPR016024 -
Mal7g0910 732 Pfam U-box domain 311 382 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0910 Mal-Chr7 25058552 25060750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0910 43 730 U-box Gene Family AT5G01830 54.323 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0910 - - cam:101506886 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0910 7 25058552 25060750 Mal7g0910 7 25058552 25060750 ECH