Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0908 ATGTTGAAACGGACCCTTCAGGTCGATATGGACGTGTATAGAAAGAAGTACCCTCGTGTAGATATCAGAGCAATAAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTGCATAGCCATGATCCTCCAGTGATACATAGAGACCTAAAGTGTGATAATATCTTTGTCAATGGCCATATGGGAAAGGTCAAAATTGGCGATTTGGGTCTTGCAGCAATTCTTAGTGGCTCCCAAAATGCACACAGTGTGATAGGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATATAATGAGCTTGTAGATATATACTCTTTTGGGATGTGTATGATAGAGTTGTTCACTTCAGAGTTTCCATATAGCGAGTGCTCCAACCCTGCTCAAATATACAAGAAAGTTACTACGGGGAAACTACCAAAGGCATTTGACAAGATTCTTGATGTAGAAGCCCAAAAGTTTGTTGGAAAATGTTTGGCAAATGTCTCAAAGAGATTATCAGCAAAAGAGCTCTTGTTGGACCCTTTTTTAGCCACGGCCCAACATGACTCACCATCAATGCCTAGTCCAACTTTACCTAGTAAACACACTCAACAAATGAATTTCAATGCAACAATGGCCAAAGAGCAAACTTCACTGAATGACCAAACAAAGAGCACACATATGACAATCACAGGGACTATCAATGAAGAGGATGGCACTGTTTTCCTTAAAGTCAAAATTTCTAACAAAATTGGTCACACAAGAAATATATACTTCCCATTTGACACCAAAAAGGACACTGCCATTGAGGTTGCAAATGAGATGGTAAAAGAACTTGAAATTAGTGACTTGGAACCAATAGAGATTGCTGAGATGATTGAAGAAGAGATTTCAACTTTAGTTCCAACATGGAGAGATTGTTGTACTTCTAAGTATCAAAGACAACATAGTTTTATCTATGGAGAAGAAGATGATATTAGTAACCACAATCCTTACTTCTCATCATCTTCTCGCTCTTCTTCTCATGGTTCTCTCCCTATGTTTTGTGCTTCCTTCAACAATAATAGCAACCATTGTGGGAATCACTATCCAATTGCTCAAGATTGGTCACAAGATGATCTTCAATATATGAATGATGATACAAGCTCTCAAAGCTCAATGAATTCCTTCAAGTGTTTCAATTTCCATTGCAACGATTCATGCAATGAAGATGAACAAGGTTCAAATCTTGTAGTAGGAGAAGAACCCCATTGTTGCAATCCAAAGAGTAACAACAAATGGACAAGATTTTGTCCTCCACAAGAGATGGTGGAGGCTGGTTTCACCAAACAATTTTGCAACATGAGAATGGACTCTCATACTCATACTCACACTCATAGGAATCATCATGGACCAAGGAGTATATGCAAAAGGCTAACAAGGATTAATTCCTATGTTGATGTGAGGAAACAACAACTACAACGATCTTTGATGGAGGAGATGCAAAAGCTAAGGATGTTCAACACAGTTGGCTCCATTGAGAATGTTGGGTTTCAAAATCCAGAAGAAGGTGGATGGTTTTATTCTTGA 1560 0.3859 MLKRTLQVDMDVYRKKYPRVDIRAIKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFVNGHMGKVKIGDLGLAAILSGSQNAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIELFTSEFPYSECSNPAQIYKKVTTGKLPKAFDKILDVEAQKFVGKCLANVSKRLSAKELLLDPFLATAQHDSPSMPSPTLPSKHTQQMNFNATMAKEQTSLNDQTKSTHMTITGTINEEDGTVFLKVKISNKIGHTRNIYFPFDTKKDTAIEVANEMVKELEISDLEPIEIAEMIEEEISTLVPTWRDCCTSKYQRQHSFIYGEEDDISNHNPYFSSSSRSSSHGSLPMFCASFNNNSNHCGNHYPIAQDWSQDDLQYMNDDTSSQSSMNSFKCFNFHCNDSCNEDEQGSNLVVGEEPHCCNPKSNNKWTRFCPPQEMVEAGFTKQFCNMRMDSHTHTHTHRNHHGPRSICKRLTRINSYVDVRKQQLQRSLMEEMQKLRMFNTVGSIENVGFQNPEEGGWFYS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0908 519 Pfam Protein kinase domain 14 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g0908 519 Gene3D - 237 303 - -
Mal7g0908 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Mal7g0908 519 SMART serkin_6 2 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g0908 519 SUPERFAMILY Protein kinase-like (PK-like) 12 220 IPR011009 -
Mal7g0908 519 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 10 511 - -
Mal7g0908 519 Gene3D Transferase(Phosphotransferase) domain 1 7 186 - -
Mal7g0908 519 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 511 - -
Mal7g0908 519 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0908 Mal-Chr7 24966395 24971968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0908 13 325 MAP Kinase Kinase Kinase AT3G51630 65.605 1.62e-139 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mal7g0908 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0908 K08867 - gmx:100816187 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0908 7 24966395 24971968 Mal7g0908 7 24966395 24971968 ECH
Mal3g2462 3 96206952 96212408 Mal7g0908 7 24966395 24971968 PCT