Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0893 ATGCAAGATCAATTCATCATCCTATCTTTGTTTCTTGTTCTTTTTGGTCCACTCCAAGTGATCTCACAAAACCAACCTTTCAATGAAGATTTGTTAGGGTTGATTGTGTTCAAAGCAGGTCTAGAAGATCCAAAAAACAAACTTTCTTCTTGGAATGAAGATGATTATAGTCCTTGCAATTGGGATGGTGTAAAATGTGATCCTTCAACAAATAGGGTTTCTTCTCTTGTTCTTGATGGATTCTCACTTTCAGGACATATCGGTAAAAGCCTTATGAGATTGCAGTTCCTTCAAATTCTTTCACTTTCTAGGAACAACTTCACAGGGAAAATAAACCATGATCTTCTTATTACACTTTGGAATCTAAAAGTTGTTGATTTGAGTGAAAACAATCTCTCTGGGACAATTCCAGATGAACTTTTTAAACAATGTTGGTCTCTTAGAGTTTTATCGTTCGCGAAAAACAATCTCACGGGTATGATTCCTGACTCTTTGAGTTCATGCTACTCGTTAGGAAGTTTGAACTTTTCGTCTAATCAACTAAATGGTGAATTACACTATGGATTGTGGTTTTTGAAGGAACTTCAATCGCTTGATCTCTCGAATAATTTTCTTGAAGGAGCGATTCCGGAAGGAATTCAAAATCTATATGATTTGAGAGAGTTAAGGCTAGGGAGGAATTTTTTCACTGGTAGGATTCCGGAGAGTATAGGGAATTGTTTGCTTTTGAAGTTGATCGATTTCGGTGATAATCTTCTAACTGGTGAAATTCCGGAGTCGATACAAAGACTTGCCTCATGTACATTTTTAAATTTGCAAGGGAATTCTTTCAATGGAAGCATTCCACATTGGATTGTTGAATTGAACAATCTAGAGATATTGGAACTTTCTTGTAATAGATTTTCTGGTCAAATTCCATTTGGCATTGGTGGTCTTAGAAGTTTGCAAGTTTTGAATTTATCTACAAACAATATTTCTGGTTCTATTCCAGTGAGTATAAAAGAGCTTAAATCTTTGTATATTCTTGATTTGAGTGATAACAAGCTTAATGGAAGCATTCCTTATGAAATACAAGGAGCAATTTCACTTAGTAAATTGAGGCTGCAAAGGAATTTCTTAGGTGGAAGAATTCCAGTCCAAATTGCAAAATGTTCAGCACTAACATCTTTGAATCTTGCACACAACAAGCTTATTGGTCCAATCCCTACATCAATTGCAGACCTAACAAATCTTCAGTATGCAGATTTATCATATAATAAACTCTCTGGAACATTACCTAAAAAGCTCACAAATCTTACACATCTTTACTCATTCAATGTTTCCTATAACAATCTTAAAGGTGAATTACCAATTGGTGGATTCTTCAATACAATCACTCCCTCATTTGTTCATGGCAATCCTTTATTATGTGGTTCTGTTGTTAATCATTCATGTGATCAATCTTATCATCCAAAACCTATTGTTTTAAACCCTAATTCAAATTACAACAATTCAAGATCTTCCTTGAAAAACCATCATCATAAGATAATGCTTAGTGTTTCTGTCTTTATTGCTATTGGTGCAGCTATTTCTATTGTTGTTGGTGTTGTAGCTGTTACTGTTTTAAATATGCATGTTAGGTCTTCAATTTTACATTCTGGTGGTGAGGACTTTAGTTTTTCGCCTGAAAAAGATACGAAATGCGGACAACTTGTGATGTTTAATGGCGATGTTATTGAGTTTGCCGATGAGGCAAATCATCTTCTTAAAGAAGGTAATGAAATCGGCCGCGGTGGATTTGGAATTGTTTATTGTGTTGTCCTTCGAGATCAGAATCCTGTTGCAATTAAGAAGCTTATAGGTTCAAGTTTGACAAAGTCACAAGAAGATTTTGAGAGTGAGGTTCAAAAGCTTGGAAAAATTAGGCATCAAAATCTTGTGGCACTTGAAGGGTATTATTGGAATTCATCTTTTCAGCTTATTATTTATGAGTACTTTTCTAGAGGGAGTTTGCATAAGCTTCTACATGATAATCAAAGCAAAGTTGTGTTTTCTTGGAGGGCAAGGTTCAAGGTTATTTTAGGAATGGCAAAAGGGTTGGCCTATTTACACCAAATGAACATAATCCATTATAATATGAAATCTACTAATGTTTTCATTGATTTGTGTGATGAACCAAAAATTGGAGATTTTGGTTTGGTGAATTTATTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCGCTCGGATACACAGCTCCTGAGTTTGCGTGCCGCACGGTTAACATAACCGAAAAATGCGACGTGTATGGTTTCGGAATTTTGGTTCTAGAAATTGTGAGTGGAAAAAAACCTGTAGAATATATGGAGGATGATGTTGTTGTTTTATGTGATACGGTTAGAAGTGAATTGGAGGATTGTAAAGTTGAGCAATGTGTTGATGATAAACTTGTTGGTAATTTTTCGCCCGAGGAAGCGATTCCTGTGATTAAATTGGGATTGGTTTGTGCATCACAAGTACCGTCGAGTCGTCCTGATATGGCTGAGGTTGTTAACATATTAGAGATGATTCAATGCTCTTCAGAAGGACAACAAGAGGAATTAAAATGA 2601 0.3552 MQDQFIILSLFLVLFGPLQVISQNQPFNEDLLGLIVFKAGLEDPKNKLSSWNEDDYSPCNWDGVKCDPSTNRVSSLVLDGFSLSGHIGKSLMRLQFLQILSLSRNNFTGKINHDLLITLWNLKVVDLSENNLSGTIPDELFKQCWSLRVLSFAKNNLTGMIPDSLSSCYSLGSLNFSSNQLNGELHYGLWFLKELQSLDLSNNFLEGAIPEGIQNLYDLRELRLGRNFFTGRIPESIGNCLLLKLIDFGDNLLTGEIPESIQRLASCTFLNLQGNSFNGSIPHWIVELNNLEILELSCNRFSGQIPFGIGGLRSLQVLNLSTNNISGSIPVSIKELKSLYILDLSDNKLNGSIPYEIQGAISLSKLRLQRNFLGGRIPVQIAKCSALTSLNLAHNKLIGPIPTSIADLTNLQYADLSYNKLSGTLPKKLTNLTHLYSFNVSYNNLKGELPIGGFFNTITPSFVHGNPLLCGSVVNHSCDQSYHPKPIVLNPNSNYNNSRSSLKNHHHKIMLSVSVFIAIGAAISIVVGVVAVTVLNMHVRSSILHSGGEDFSFSPEKDTKCGQLVMFNGDVIEFADEANHLLKEGNEIGRGGFGIVYCVVLRDQNPVAIKKLIGSSLTKSQEDFESEVQKLGKIRHQNLVALEGYYWNSSFQLIIYEYFSRGSLHKLLHDNQSKVVFSWRARFKVILGMAKGLAYLHQMNIIHYNMKSTNVFIDLCDEPKIGDFGLVNLLPMLDHCVLSSKIQSALGYTAPEFACRTVNITEKCDVYGFGILVLEIVSGKKPVEYMEDDVVVLCDTVRSELEDCKVEQCVDDKLVGNFSPEEAIPVIKLGLVCASQVPSSRPDMAEVVNILEMIQCSSEGQQEELK* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0893 866 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 290 856 - -
Mal7g0893 866 SUPERFAMILY Protein kinase-like (PK-like) 582 854 IPR011009 -
Mal7g0893 866 PRINTS Leucine-rich repeat signature 336 349 - -
Mal7g0893 866 PRINTS Leucine-rich repeat signature 195 208 - -
Mal7g0893 866 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 290 856 - -
Mal7g0893 866 Pfam Leucine Rich Repeat 195 216 IPR001611 GO:0005515
Mal7g0893 866 Pfam Leucine Rich Repeat 219 240 IPR001611 GO:0005515
Mal7g0893 866 Gene3D Transferase(Phosphotransferase) domain 1 659 866 - -
Mal7g0893 866 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 306 - -
Mal7g0893 866 Pfam Leucine rich repeat 362 421 IPR001611 GO:0005515
Mal7g0893 866 Pfam Leucine rich repeat 290 349 IPR001611 GO:0005515
Mal7g0893 866 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Mal7g0893 866 Gene3D Ribonuclease Inhibitor 25 112 IPR032675 -
Mal7g0893 866 ProSiteProfiles Leucine-rich repeat profile. 314 336 IPR001611 GO:0005515
Mal7g0893 866 Gene3D Ribonuclease Inhibitor 118 481 IPR032675 -
Mal7g0893 866 ProSitePatterns Protein kinases ATP-binding region signature. 588 611 IPR017441 GO:0005524
Mal7g0893 866 Gene3D Phosphorylase Kinase; domain 1 553 658 - -
Mal7g0893 866 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Mal7g0893 866 SUPERFAMILY L domain-like 215 471 - -
Mal7g0893 866 ProSiteProfiles Protein kinase domain profile. 582 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g0893 866 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 306 - -
Mal7g0893 866 Pfam Protein tyrosine and serine/threonine kinase 583 849 IPR001245 GO:0004672|GO:0006468
Mal7g0893 866 SMART LRR_typ_2 119 143 IPR003591 -
Mal7g0893 866 SMART LRR_typ_2 288 312 IPR003591 -
Mal7g0893 866 SMART LRR_typ_2 216 240 IPR003591 -
Mal7g0893 866 SMART LRR_typ_2 336 359 IPR003591 -
Mal7g0893 866 SMART LRR_typ_2 192 215 IPR003591 -
Mal7g0893 866 SMART LRR_typ_2 432 456 IPR003591 -
Mal7g0893 866 SUPERFAMILY L domain-like 29 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0893 Mal-Chr7 24362344 24365482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0893 11 859 Receptor kinase-like Gene Family AT5G01890 50.938 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mal7g0893 PK_Tyr_Ser-Thr 3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0893 - - gmx:100813535 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0893 7 24362344 24365482 Mal7g0893 7 24362344 24365482 ECH
Mal3g2491 3 96633986 96637246 Mal7g0893 7 24362344 24365482 PCT