Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0886 ATGGCTGTTGTTCTTCATCGTATAGTTTCTCTTGTAGTACTTTATTCTCTTCTGGTTAACCCTTGTTATTGCCTCAACCGTAAATTATTTAATGTTTCTGAAATTCAATATGATAATAATCAATGGCAAATGGCAATAGCTACATGGTATGGACCTCCCAATGGTGCTGGATCCGATGGTGGTGCATGTGGATATGGTGATAGTGTAGAGAGTCCTCCACTTTCTAAAATGATATCAGCTGGAGGTCCATCTCTTTTCCTTGAGGGCAGAGGATGTGGTGCTTGTTATGAGGTAAAATGCACAGAAAATAGTGCATGCTCAGGAAATCCCGTGACAGTGATGATAACTGATAATTGTCCTGGATGTGTAGAATTTGTCCATTTTGATCTAAGTGGAATTGCCATTGGTTCCCTTGCAAATAATGGCCAGGCTGATAATCTTCGCAATGCTGGAAACATTAATGTTCAATACCGAAGGGTTGCATGCTCTTTTGGAACATCAATAGCTTTTACAATTGATAGTGGATCCAACCCATACTATTTTGCTACTGAAATAGAATATGAAAATGGAGATGGTGACATTGTAGATGTTGAATTGAACCAATCAAACACTAACACATGGCTTCCAATGCAACGTTCTTGGGGTGCAAGATGGGCTTTGAACTCAGGTTCACAATTGCAACCTCCATTTTCCATTAAGCTCACAGAAAGTGGAAGTGGAAATGGACTTAGAGACCTTCCAAGTAACAACACCATTATAGCTAACAATGTGATTCCAAAAAATTGGCAAGCTGGCCAAGTTTATCGTTCACTGGTTAATTTCAAGAGTCTTTGA 834 0.3933 MAVVLHRIVSLVVLYSLLVNPCYCLNRKLFNVSEIQYDNNQWQMAIATWYGPPNGAGSDGGACGYGDSVESPPLSKMISAGGPSLFLEGRGCGACYEVKCTENSACSGNPVTVMITDNCPGCVEFVHFDLSGIAIGSLANNGQADNLRNAGNINVQYRRVACSFGTSIAFTIDSGSNPYYFATEIEYENGDGDIVDVELNQSNTNTWLPMQRSWGARWALNSGSQLQPPFSIKLTESGSGNGLRDLPSNNTIIANNVIPKNWQAGQVYRSLVNFKSL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0886 277 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 179 270 IPR007117 -
Mal7g0886 277 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 60 167 IPR007112 -
Mal7g0886 277 SMART dpbb_1 78 157 IPR007112 -
Mal7g0886 277 PRINTS Major pollen allergen Lol pI signature 216 233 IPR005795 GO:0005576|GO:0019953
Mal7g0886 277 PRINTS Major pollen allergen Lol pI signature 100 110 IPR005795 GO:0005576|GO:0019953
Mal7g0886 277 PRINTS Major pollen allergen Lol pI signature 139 154 IPR005795 GO:0005576|GO:0019953
Mal7g0886 277 PRINTS Major pollen allergen Lol pI signature 117 132 IPR005795 GO:0005576|GO:0019953
Mal7g0886 277 PRINTS Major pollen allergen Lol pI signature 80 91 IPR005795 GO:0005576|GO:0019953
Mal7g0886 277 PRINTS Major pollen allergen Lol pI signature 170 185 IPR005795 GO:0005576|GO:0019953
Mal7g0886 277 PRINTS Major pollen allergen Lol pI signature 186 201 IPR005795 GO:0005576|GO:0019953
Mal7g0886 277 PANTHER EXPANSIN-B3 2 277 - -
Mal7g0886 277 Gene3D - 164 275 IPR036749 -
Mal7g0886 277 PANTHER EXPANSIN-LIKE PROTEIN B1 2 277 - -
Mal7g0886 277 Gene3D - 27 163 IPR036908 -
Mal7g0886 277 Pfam Expansin C-terminal domain 168 259 IPR007117 -
Mal7g0886 277 SUPERFAMILY PHL pollen allergen 167 270 IPR036749 -
Mal7g0886 277 Pfam Lytic transglycolase 79 157 IPR009009 -
Mal7g0886 277 SUPERFAMILY Barwin-like endoglucanases 35 164 IPR036908 -
Mal7g0886 277 PRINTS Expansin/Lol pI family signature 82 100 IPR007118 GO:0005576
Mal7g0886 277 PRINTS Expansin/Lol pI family signature 207 221 IPR007118 GO:0005576
Mal7g0886 277 PRINTS Expansin/Lol pI family signature 150 166 IPR007118 GO:0005576
Mal7g0886 277 PRINTS Expansin/Lol pI family signature 41 56 IPR007118 GO:0005576
Mal7g0886 277 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0886 Mal-Chr7 24231718 24234229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0886 20 274 Expansin Gene Family AT1G65680 51.938 1.82e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0886 - - gmx:100786475 384.415