Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0885 ATGTTTCCTAGCTCAAGCATAGAAGACAACAAAACTATGGTTCAACCACCATCACATACCAAACTCACCAATGGTGTTTTGTCCAACGGGAAACATTACTCTCCTTCTGATGACTTAGAGACCTTCTACGTCAAACTCACTGAAGTGTTGGACTCATCTGGTTTCAATATCAGAGAAACATCCTTAGACTTGTACCTGTTTTACTTGGAGGTCACCAGAAGAGGAGGTTTTCACAAGGTTGGTCTACAAAACAAATGGGTTGAAGTTGTCTCTGCACTAAAACTGGAAGGCAACAATGCAATGTTATCTGCTCAAGTTGAAAAGCTCTATGCAACACTTCTATTCAAATTTGAGAAATTGTACTTCTACAGGTTTCCTGCAACTGGCATCCCCAAAGGTATCTAA 405 0.4025 MFPSSSIEDNKTMVQPPSHTKLTNGVLSNGKHYSPSDDLETFYVKLTEVLDSSGFNIRETSLDLYLFYLEVTRRGGFHKVGLQNKWVEVVSALKLEGNNAMLSAQVEKLYATLLFKFEKLYFYRFPATGIPKGI* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0885 134 PANTHER HMG (HIGH MOBILITY GROUP) BOX PROTEIN 10 127 - -
Mal7g0885 134 Pfam ARID/BRIGHT DNA binding domain 40 118 IPR001606 GO:0003677
Mal7g0885 134 SUPERFAMILY ARID-like 37 122 IPR036431 GO:0003677
Mal7g0885 134 MobiDBLite consensus disorder prediction 1 27 - -
Mal7g0885 134 Gene3D - 25 126 IPR036431 GO:0003677
Mal7g0885 134 CDD ARID 40 118 - -
Mal7g0885 134 SMART bright_3 37 123 IPR001606 GO:0003677
Mal7g0885 134 SMART ARID_2 33 118 - -
Mal7g0885 134 ProSiteProfiles ARID domain profile. 29 122 IPR001606 GO:0003677
Mal7g0885 134 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 10 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0885 Mal-Chr7 24224746 24226250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0885 62 123 ARID Transcription Factor Family AT1G76110 38.710 3.03e-10 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal7g0885 ARID 1.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0885 - - mtr:MTR_5g095070 166.392