Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0883 ATGGCTTTGATTGTGGATCAACAATCAAACTTCAAACACTTTTGTAAAATTTGCAAAAAAGGCTTTGGATGTGGAAGAGCATTAGGAGGACACATGCGAGCTCATGGCATAGGTGACGAAACAGGTCAAATGGACGACGATGATCCGGCGAGCGATTGGGAAGGTGGCAATGTCCCACCAAGTAACAAACGTATGTATTCTTTAAGAACAAATCCTAATAAGCTAAAAAGTTGTAGGGTTTGTGAGCATTGTGGCAAAGAATTTTTTTCTTGGAAATCATTCCTCGAACACGGAAAATGCAACTCAGACGACGCGGATGAAGAGTTTCTCGTATCCTCTCCAGAATCTGACGCCATGGCAGACGATGGTGATGGCGCCAGCGGCAGGAGAGGATGCGGCTGGTCAAAAAGGAAAAGGTCAATGCGAACTAAAGTAGGTAGTTATAATAACAATTATATTAATCCTTCAAGTGAAGAAGAAGACCTAGCAAATTGTTTAATGATGTTGTCCAATGCTATTGTTGATCCCCTTGAGGTTGAACCAGAAGAATCATGTGCCTCAGCTAGCAAAGATGAAGAAAGAAGAAACCCTATGAATTTCATTGCACCTACATTGTCTTATAGAATCCCCTACGAAAACAACAATAACAACAATAAGGCCAAAGGTGTGGCAAAAGGATTATTTGAATGCAAAGCATGCAAAAAAGTTTTCAACTCACACCAAGCATTAGGTGGCCATAGAGCAAGTCACAAAAAGGTTAAGGGATGTTTTGCTGCAAGGCTTGATCAAAACCTTGATGATAGTATTGTTGAGGATGATGTAATCACACATGAAGAGTTTTTTCCTTCAAAATCAAACTCAACCCTACAATTTGATCATGGAACTTCCAACAACCCTACATTGATGGCTTCTTCATCCAAGAGAAAATCCAAAGTGCATGAATGCTCAATTTGTCATAGGAGTTTCTCTTCGGGACAAGCATTAGGTGGTCACAAGAGATGTCATTGGATCACATCAAATGCACCCGACACATCAACATTGGCTAGGTTTCAACAATTTCAAGACCATATAGAACAAATACCTAAATTTGATAACTCTTCTGAGCCAATTGATCTCAAACTTGATCTTAATCTTCCGGCTTCGGCAAATACACAAATTTACTTGCAACCGCCATGGGGTGCAAATTCAAGTGCAACAAAGGACAACAACATAAAAGAGGATAACAATAGTATACAAAATCAAAACAACAACCCAATTGATCAAAATAATGACACTGATGAGAACAACAAAAACAAAAACCTTAATGCTTTGGTACAAAATATTGATAATGAAGATGATAGCAAGGTCAAGTTGGCCAAATTAAGTGAGCTAAAGGATGTAATCAACATTGGTGGAAGTTCTTCACCATGGTTGCAAGTTGGAATTGGTACAACAACTGATGTGAGGAATGATACGTAA 1458 0.3896 MALIVDQQSNFKHFCKICKKGFGCGRALGGHMRAHGIGDETGQMDDDDPASDWEGGNVPPSNKRMYSLRTNPNKLKSCRVCEHCGKEFFSWKSFLEHGKCNSDDADEEFLVSSPESDAMADDGDGASGRRGCGWSKRKRSMRTKVGSYNNNYINPSSEEEDLANCLMMLSNAIVDPLEVEPEESCASASKDEERRNPMNFIAPTLSYRIPYENNNNNNKAKGVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDQNLDDSIVEDDVITHEEFFPSKSNSTLQFDHGTSNNPTLMASSSKRKSKVHECSICHRSFSSGQALGGHKRCHWITSNAPDTSTLARFQQFQDHIEQIPKFDNSSEPIDLKLDLNLPASANTQIYLQPPWGANSSATKDNNIKEDNNSIQNQNNNPIDQNNDTDENNKNKNLNALVQNIDNEDDSKVKLAKLSELKDVINIGGSSSPWLQVGIGTTTDVRNDT* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0883 485 MobiDBLite consensus disorder prediction 115 135 - -
Mal7g0883 485 MobiDBLite consensus disorder prediction 37 61 - -
Mal7g0883 485 ProSitePatterns Zinc finger C2H2 type domain signature. 315 335 IPR013087 -
Mal7g0883 485 ProSitePatterns Zinc finger C2H2 type domain signature. 15 35 IPR013087 -
Mal7g0883 485 ProSiteProfiles Zinc finger C2H2 type domain profile. 228 255 IPR013087 -
Mal7g0883 485 ProSiteProfiles Zinc finger C2H2 type domain profile. 313 335 IPR013087 -
Mal7g0883 485 Gene3D Classic Zinc Finger 11 100 - -
Mal7g0883 485 Pfam C2H2-type zinc finger 13 35 - -
Mal7g0883 485 Pfam C2H2-type zinc finger 228 252 - -
Mal7g0883 485 Pfam C2H2-type zinc finger 312 337 - -
Mal7g0883 485 SUPERFAMILY beta-beta-alpha zinc fingers 227 335 IPR036236 -
Mal7g0883 485 Gene3D Classic Zinc Finger 226 335 - -
Mal7g0883 485 SMART c2h2final6 13 35 IPR013087 -
Mal7g0883 485 SMART c2h2final6 313 335 IPR013087 -
Mal7g0883 485 SMART c2h2final6 79 99 IPR013087 -
Mal7g0883 485 SMART c2h2final6 228 250 IPR013087 -
Mal7g0883 485 SUPERFAMILY beta-beta-alpha zinc fingers 13 98 IPR036236 -
Mal7g0883 485 MobiDBLite consensus disorder prediction 389 431 - -
Mal7g0883 485 PANTHER OS02G0659100 PROTEIN 1 484 - -
Mal7g0883 485 PANTHER OS02G0659100 PROTEIN 1 484 - -
Mal7g0883 485 ProSitePatterns Zinc finger C2H2 type domain signature. 230 250 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0883 Mal-Chr7 24176248 24177705 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0883 136 378 C2H2 Transcription Factor Family AT1G02040 36.145 2.09e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g0883 zf-C2H2_6 1.6e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0883 - - gmx:100793846 696.812