Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0840 ATGTCCTCTTCATCATCCACTTCCTTTTCACCGGACCAGCAACAACAGCAACAACTCTCTCCTTCAGACCAGCTATGTTATGTCCATTGCAATTTCTGTGACACTGTTCTCGCGGTGAGTGTTCCTTGCACAAGTTTGTTCAAGACTGTGACAGTGAGATGTGGTCATTGCACCAACCTTCTGTCAGTTAACATGCGTGCTTTGCTCCTTCCTGCTGCTAATCAACTTCACCTTGGACACAATTTCTTCAATCCTCAAACTCTTATGGAGGAGATTCGAAATGGACCTTCAACAAACATGATGATGAATCAGCTTCCAAATCCAAATGATTTGATGATGAGCACCATGAGAGGAGGGCATCATGAAGAAATCCCTAAACCTCCACCTGCTAATAGACCTCCGGAGAAGAGACAGAGAGTTCCATCTGCCTACAACCGCTTCATCAAGGATGAGATCCAACGTATCAAAGCTGGAAATCCTGATATAAGCCACAGAGAGGCTTTTAGTGCAGCTGCAAAAAATTGGGCCCACTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGAATCAGAGGACGTGCTTATGAAAGATGGGTTTTTCACACAAGCAAATGTAGGTGTCTCTCCCTACTAA 666 0.4444 MSSSSSTSFSPDQQQQQQLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRALLLPAANQLHLGHNFFNPQTLMEEIRNGPSTNMMMNQLPNPNDLMMSTMRGGHHEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQESEDVLMKDGFFTQANVGVSPY* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0840 221 PANTHER PROTEIN YABBY 6-RELATED 1 219 IPR006780 GO:0007275
Mal7g0840 221 MobiDBLite consensus disorder prediction 117 139 - -
Mal7g0840 221 SUPERFAMILY HMG-box 130 179 IPR036910 -
Mal7g0840 221 PANTHER PROTEIN YABBY 4 1 219 - -
Mal7g0840 221 MobiDBLite consensus disorder prediction 117 133 - -
Mal7g0840 221 Pfam YABBY protein 21 185 IPR006780 GO:0007275
Mal7g0840 221 Gene3D High mobility group box domain 125 190 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0840 Mal-Chr7 22316985 22321202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0840 32 219 C2C2-YABBY Transcription Factor Family AT4G00180 63.158 1.68e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mal7g0840 YABBY 6.6e-74 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0840 K25796 - gmx:100781267 380.178