Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0828 ATGTCCAATAATGTAACAAAGTTGTTAAGTAACACCTTGTCTCTTAACAAGGTTCCTTACCAAGAACCAAGCTACAAAGATGGATTTCCAACATGGGTTAAACCCGGTGATAGGAAACTTCTTCAAACATCTTCGGCGGCTTCAAAGGCTAATGTCGTGGTTGCTAAAGATGGTTCCGGTAAGTACACAACGGTGAAGGCGGCGACGGATGCTGCACCAAGTGGTAGTGGAAGGTATGTGATATATGTGAAGGCTGGTGTATACAATGAACAAGTTGAGATCAAAGCAAAAAATGTCATGTTGGTGGGTGATGGTATTGGCAAGACCATAATCACTGGTAGCCAAAGTGTTGGAGGTGGCACCACTACCTTCCGTTCAGCAACTGTTGCTGCTGTTGGTGATGGATTTATTGCTCAAGACATCACATTTAGAAACACGGCTGGAGCTGCAAATCATCAAGCTGTTGCATTTCGTTCTGGCTCAGATCTATCAGTATTTTACAAGTGTAGTTTTGAAGGTTATCAAGACACACTTTATGTTCACTCAGAGAGACAATTTTATAGAGAATGTAACATCTATGGCACAGTTGACTTCATCTTCGGCAACGCCGCCGTAGTTTTGCAAAACTGTAACATTATTGCAAGAAACCCACCTCAAAAAACCATCACAGTTACTGCTCAAGGAAGAACTGATCCAAACCAAAACACTGGAATAATAATTCACAATTCTAGGGTCTCTGCTGCATCGGATTTAAACCCTAGTTCTGTTAAATCTTATCTTGGAAGACCGTGGCAAAAATATTCAAGAACAGTTTTCATGAAAACTGTTATTGATGGTTTTATTAACCCTGCTGGTTGGTTGCCATGGGATGGTAATTTTGCTTTGGATACTTTATATTATGCTGAATATGCTAATACAGGTTCAGGTTCAACCACTTCAAATAGAGTTACATGGAAAGGTTACCATGTTCTTACTAGTGCTTCTCAAGCTTCACCTTTCACCGTTGGGAATTTCATTGCTGGAAATTCATGGTTACCGAACACGGGTGTGCCTTTTACCTCCGGACTTTAA 1071 0.408 MSNNVTKLLSNTLSLNKVPYQEPSYKDGFPTWVKPGDRKLLQTSSAASKANVVVAKDGSGKYTTVKAATDAAPSGSGRYVIYVKAGVYNEQVEIKAKNVMLVGDGIGKTIITGSQSVGGGTTTFRSATVAAVGDGFIAQDITFRNTAGAANHQAVAFRSGSDLSVFYKCSFEGYQDTLYVHSERQFYRECNIYGTVDFIFGNAAVVLQNCNIIARNPPQKTITVTAQGRTDPNQNTGIIIHNSRVSAASDLNPSSVKSYLGRPWQKYSRTVFMKTVIDGFINPAGWLPWDGNFALDTLYYAEYANTGSGSTTSNRVTWKGYHVLTSASQASPFTVGNFIAGNSWLPNTGVPFTSGL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0828 356 ProSitePatterns Pectinesterase signature 1. 75 94 IPR018040 -
Mal7g0828 356 PANTHER PECTINESTERASE 1 355 - -
Mal7g0828 356 PANTHER PECTINESTERASE 1 355 - -
Mal7g0828 356 Gene3D - 45 356 IPR012334 -
Mal7g0828 356 Pfam Pectinesterase 51 342 IPR000070 GO:0030599|GO:0042545
Mal7g0828 356 ProSitePatterns Pectinesterase signature 2. 192 201 IPR033131 -
Mal7g0828 356 SUPERFAMILY Pectin lyase-like 45 355 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0828 Mal-Chr7 21834932 21836631 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0828 1 356 Carbohydrate Esterase AT2G45220 74.373 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0828 K01051 - gmx:100794948 643.654