Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0748 ATGCCCCTGTTTGGACGTGCCACGTTGGCACAACTTCCAAGGCAACATGCTACGTCAGGCACCTCACGTTGGCACAACTTTAACAGCAGCGTGGCACACTGTTTGGAATATAGAAGAGAATTCCAATCTTCAATTCCAAGTGTGCATGCTAGCATGGAACATTATAGAAGAGAGGTACGAGTCGATATGCCTTTAGATTCAAGAGAGAAGATTGCTAGGTGTGTGTTAAGAGCATTGCCACCAGTTAAAACCTTTAATGGTGACCAAGCTAGTGATTATTGTCCTATTTGCAAGGAAGAATATAAGAAAGGGGAGTTGATTCAACCTTTTCCTTTGTGTGCTCATGAATTTCATTCATCATGTCTCAATTCTTGGTTATTTGGAGGAAAATCAACTTGCCCTGTTTGCCGTCAATATTTGTTAATTGGTACATCTAGAGGCACATAG 447 0.4161 MPLFGRATLAQLPRQHATSGTSRWHNFNSSVAHCLEYRREFQSSIPSVHASMEHYRREVRVDMPLDSREKIARCVLRALPPVKTFNGDQASDYCPICKEEYKKGELIQPFPLCAHEFHSSCLNSWLFGGKSTCPVCRQYLLIGTSRGT* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0748 148 SMART ring_2 94 136 IPR001841 -
Mal7g0748 148 Pfam Ring finger domain 93 137 IPR001841 -
Mal7g0748 148 PANTHER OS06G0666500 PROTEIN 31 139 - -
Mal7g0748 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 140 IPR013083 -
Mal7g0748 148 ProSiteProfiles Zinc finger RING-type profile. 94 137 IPR001841 -
Mal7g0748 148 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 31 139 - -
Mal7g0748 148 SUPERFAMILY RING/U-box 75 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0748 Mal-Chr7 19653903 19656255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0748 75 142 C3H Transcription Factor Family AT1G76410 40.278 7.00e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0748 K15692 K15706 mtr:MTR_4g073810 114.39