LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g0675	ATGGATTACGAACCCTACGACAGTAGTGGAACTGATGATGATCTTCCTCCAACCCATCAAAATAGAGTTCCCAGGGGAGGGCGTCTTGCCGGGAATGGAAGATCTGCTGTTGGTTCAATTCCATACCCCAGGGTGTATGGTGAAATTGATATGGAAACCCAAATTCATCAACTTGAGCAGGAAGCATACAGTTCAGTTCTGAGGGCCTTTAAAGCTCAAGCTGATGCCATTACTTGGGAGAAAGAAAGTTTGATTACAGAGCTGAGAAAAGAGCTGAAATTATCTAATGAGGAACACAGAGAACTCCTAGGTCGGGTTAATGCGGATGACATGATACGGAGGATAAGGGAATGGAGACAGACAGGTGGCCATCAGCCTGGTGTGCTAAGTACTGGTCAAGCTCTGCATGATTCAAATCCCAGTCCGACTGTCTCCGCATCTCGCAAAAAGCAGAAGATTACACCACCCATACCATCACGTTCTTTTGGCGGGCCTTCTCCCTCTTTTCACCCCCAAACGGTGACTGCACCCCACCAGCCATCTTCTTCTGCAGGAAAGCGAGGATCTGGCCCTGGATCAAAGGGAAAGAAGCAAAAACCTGGTCAAATATTACCTGGTGTATCTTCAGTGAAGCAGTTTCCTCCTTCAGGACCAGGTGGAAGGAATCAAGTACCTAATAGAGCTGTCATGGGTGGACATGCCGAGGGTGGATCATTTGATGCACCAATGATCGGTAGGAAAGTGCGGACAAGATGGCCTGACGACAATAACTTCTATGAAGCTGTTATTTGTGATTACAATCCACATGATGGACGGCATAGTCTGGTCTATGACATGGGGAGTGCAAATGAAACATGGGAATGGGTTAAACTGTCAGAGATATCTCCTGAAGATATTCAGTTGGTAGAAGAGGAGGATCCTGAAATTAATCATCACGGGGGTTTTAGGGGTCCTGGTCATGTGATGAATAGGTCTGTAGGGCGTGATAGTGGTCCAGGAGTTGGAAGAGGTAGAGGGGTTCCAAAGGGTCAGTCTAGAAAAGATTTTTTGTCATCACAGAATGGCGTAGGAAAGAAGGCTCCTGATGATATTCAGATACTGCACACAGACACACTAATAAAAGAGGTGGAGAGGGTATTTAGTGCAAATCATCCTGATCCCCTTGAAATTGAGAAAGCGAAGAAAGTATTAAAGGATCATGAGCAGGCTCTTGTCGATGCCCTTGCAAGACTTACGGATCTTTCTGATGGTGAAAGTGAGGGGCCTGGCCACCGTTTCCGACACAGTCAATCAATGGATCGAGAATGA	1308	0.4648	MDYEPYDSSGTDDDLPPTHQNRVPRGGRLAGNGRSAVGSIPYPRVYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWEKESLITELRKELKLSNEEHRELLGRVNADDMIRRIREWRQTGGHQPGVLSTGQALHDSNPSPTVSASRKKQKITPPIPSRSFGGPSPSFHPQTVTAPHQPSSSAGKRGSGPGSKGKKQKPGQILPGVSSVKQFPPSGPGGRNQVPNRAVMGGHAEGGSFDAPMIGRKVRTRWPDDNNFYEAVICDYNPHDGRHSLVYDMGSANETWEWVKLSEISPEDIQLVEEEDPEINHHGGFRGPGHVMNRSVGRDSGPGVGRGRGVPKGQSRKDFLSSQNGVGKKAPDDIQILHTDTLIKEVERVFSANHPDPLEIEKAKKVLKDHEQALVDALARLTDLSDGESEGPGHRFRHSQSMDRE*	436

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g0675	435	SMART	ENT_2	51	124	IPR005491	-
	Mal7g0675	435	Coils	Coil	85	105	-	-
	Mal7g0675	435	Gene3D	-	243	298	-	-
	Mal7g0675	435	MobiDBLite	consensus disorder prediction	417	435	-	-
	Mal7g0675	435	Pfam	ENT domain	53	120	IPR005491	-
	Mal7g0675	435	PANTHER	PROTEIN EMSY-LIKE 4	1	435	IPR033485	GO:0050832
	Mal7g0675	435	MobiDBLite	consensus disorder prediction	1	37	-	-
	Mal7g0675	435	Coils	Coil	390	410	-	-
	Mal7g0675	435	MobiDBLite	consensus disorder prediction	412	435	-	-
	Mal7g0675	435	MobiDBLite	consensus disorder prediction	122	238	-	-
	Mal7g0675	435	ProSiteProfiles	EMSY N-terminal (ENT) domain profile.	51	138	IPR005491	-
	Mal7g0675	435	SUPERFAMILY	Tudor/PWWP/MBT	243	282	-	-
	Mal7g0675	435	MobiDBLite	consensus disorder prediction	310	362	-	-
	Mal7g0675	435	SUPERFAMILY	ENT-like	46	159	IPR036142	-
	Mal7g0675	435	MobiDBLite	consensus disorder prediction	165	188	-	-
	Mal7g0675	435	MobiDBLite	consensus disorder prediction	124	154	-	-
	Mal7g0675	435	Gene3D	ENT domain	46	154	IPR036142	-
	Mal7g0675	435	PANTHER	PROTEIN EMSY-LIKE 3-LIKE ISOFORM X2	1	435	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g0675	Mal-Chr7	18105339	18112190	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g0675	-		-	gmx:100791651	719.153

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal7g0675	7	18105339	18112190	Mal7g0675	7	18105339	18112190	ECH
	Mal7g0675	7	18105339	18112190	Mal4g0613	4	6263136	6265167	ECH