Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal7g0644 | ATGGAAGAAAACAACGCATTCAAAGATCAACAACTTGTTCCAAACGAAGAAGAACAAGAAATCAACGAATCCTTTGTTTGCTGCGTTTGCTTGGATCTGTTATACAAGCCCATTGTGCTATCTTGTGGCCACGTATTATGTTTCTGGTGTGTCCATAGATCAATGAATAATTCACGCGAATCCCATTGTCCAACTTGTAGGCATCCATATTATCACTTTCCAACAATTTGTCAAATGTTTCACTTTTTGCTTCTTAAGACATATCCTGAAGCTTACAAGAGAAGGGAAAATCAGACACTTGAGGAAGAAGAGAAATCGGATTATTTCTCCCCTCAAGTTATATGTGATCAACCTGCAAATTCTCCTACCAGTACTACCATAAATCAGACGTCTAACTCATTCAGCACAGAATCTTTTGAAAGTATGGAGCAATCAGGGTCTGCAAATCATAAAGGAGATGAAGGCATCACTTCTGAATACTCTTCTGACAGGAGAGATGGAATTATAATGTCTCAAAATGAGCACAATCAACAACCAAAAATATTAGTTGAAGATTTAATGTGTTCAATGTGCAAGCAACTGCTCATTCATCCTGTTGCTCTTAATTGTGGTCATGTATACTGTGGGACTTGTATTACCGACTTATCTCATGAGATGCTTAGATGTCAAGTTTGCCAAAGTCCACATCCTGGAGGATTTCCAAAAGTTTGTTTGGCTCTTGACCAATATTTAGAGGAGCAATTTCCAGAAGAGTACACACAGAGAAGAGATGCAATTCAACTTAGCCAAATCAAAGTCCAACTTGAGACCACATCTTCTTGTTCATTGTCTAAGGACACTGGGGAAAAGATAGATTGGGGGTCTAGTCCTGGATTGTTAGTTCACAGAGGAGTTGGTTGTGATTTTTGCGGGTTGTACCCAATAATCGGGGACAGATATAGATGTGTTGACTGTGAAGAGATTGTCGGCTTTGATCTTTGTGGTGATTGCTATAAGAACCGCTCAAAGCGTCCGGGACGATTTAATCAGAATCACACCCCAGACCACAAGTTCGAGCTTGTACAATATCGAGGAATGCTAATTAGCCGTGGACAAGATTCTTCGGATTTAATAGTTTTACCGGATGATCCTGATTCCTCGACTGATGAAGAATAA | 1155 | 0.3965 | MEENNAFKDQQLVPNEEEQEINESFVCCVCLDLLYKPIVLSCGHVLCFWCVHRSMNNSRESHCPTCRHPYYHFPTICQMFHFLLLKTYPEAYKRRENQTLEEEEKSDYFSPQVICDQPANSPTSTTINQTSNSFSTESFESMEQSGSANHKGDEGITSEYSSDRRDGIIMSQNEHNQQPKILVEDLMCSMCKQLLIHPVALNCGHVYCGTCITDLSHEMLRCQVCQSPHPGGFPKVCLALDQYLEEQFPEEYTQRRDAIQLSQIKVQLETTSSCSLSKDTGEKIDWGSSPGLLVHRGVGCDFCGLYPIIGDRYRCVDCEEIVGFDLCGDCYKNRSKRPGRFNQNHTPDHKFELVQYRGMLISRGQDSSDLIVLPDDPDSSTDEE* | 385 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal7g0644 | 384 | SUPERFAMILY | RING/U-box | 290 | 354 | - | - | |
Mal7g0644 | 384 | ProSiteProfiles | Zinc finger ZZ-type profile. | 295 | 359 | IPR000433 | GO:0008270 | |
Mal7g0644 | 384 | Pfam | Zinc finger, ZZ type | 295 | 336 | IPR000433 | GO:0008270 | |
Mal7g0644 | 384 | Gene3D | - | 292 | 355 | IPR043145 | - | |
Mal7g0644 | 384 | ProSitePatterns | Zinc finger RING-type signature. | 42 | 51 | IPR017907 | - | |
Mal7g0644 | 384 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 255 | IPR013083 | - | |
Mal7g0644 | 384 | ProSiteProfiles | Zinc finger RING-type profile. | 188 | 226 | IPR001841 | - | |
Mal7g0644 | 384 | SMART | ring_2 | 188 | 225 | IPR001841 | - | |
Mal7g0644 | 384 | SMART | ring_2 | 27 | 66 | IPR001841 | - | |
Mal7g0644 | 384 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 11 | 118 | IPR013083 | - | |
Mal7g0644 | 384 | MobiDBLite | consensus disorder prediction | 119 | 155 | - | - | |
Mal7g0644 | 384 | MobiDBLite | consensus disorder prediction | 119 | 160 | - | - | |
Mal7g0644 | 384 | SUPERFAMILY | RING/U-box | 180 | 248 | - | - | |
Mal7g0644 | 384 | ProSiteProfiles | Zinc finger RING-type profile. | 27 | 67 | IPR001841 | - | |
Mal7g0644 | 384 | Pfam | Zinc finger, C3HC4 type (RING finger) | 26 | 70 | - | - | |
Mal7g0644 | 384 | SUPERFAMILY | RING/U-box | 19 | 77 | - | - | |
Mal7g0644 | 384 | PANTHER | UNCHARACTERIZED | 13 | 366 | - | - | |
Mal7g0644 | 384 | Pfam | RING-type zinc-finger | 188 | 216 | IPR027370 | - | |
Mal7g0644 | 384 | ProSitePatterns | Zinc finger RING-type signature. | 203 | 212 | IPR017907 | - | |
Mal7g0644 | 384 | SMART | zz_5 | 294 | 340 | IPR000433 | GO:0008270 | |
Mal7g0644 | 384 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRT1-LIKE | 13 | 366 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal7g0644 | Mal-Chr7 | 17115154 | 17126045 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal7g0644 | 17 | 67 | C3H Transcription Factor Family | AT1G74990 | 38.462 | 6.19e-08 | 49.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal7g0644 | - | - | mtr:MTR_4g022320 | 660.988 |