Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0620 ATGGCCCTTTTCACTCACAACCCATCATTCCCTGTTGGTCTCAAGGTTATTGCAATTGATCATGACATCACTCACCTTAACACCATTCAGGATATGTGTAATCGATTCCATTATCATGTTACCAAATGCAGTACGGCTTCTGATGCCGTGAACTTGTTGGAAAGAAAAGAGTGCTTCGATGTAATGTTGATTGATGATCATATGCCAAACATGGATGCCTATCACTTTGTTCAACATGCTACTGAACAACTCAACATTCCTGTTATTATGATGTCTTTTGATCCCACAGAAAGTTCTGTTATGAAATCTATCTCATATGGGGCTTGTGCATATTGGACCAAGCCTTTGTATGAGGAACAATTCAAGAACATGTGGCAGCATGTTGTAAGAAAAGGTTTAATGGAAAATAAAGAACTTCAAATTAATGGAAGCTCGGAGGTTCAAGGTGTTAGAAAACGGGGGAGAGACGATGATAATAGCTCAAATGAAGATGAAAATGGCTCGAATGAAACAAATGCAAAGAATGCCCGTTTGTCATGGTCGCCAAAACTGCATCAACGATTTCTATGGGCTATCAATCAAATTGGCCTTGATAAGGCAAAGCCCAAATTGATTCTCAAAGTGATGGATGTTCGTGATTTGACTATAGGACATGTTGCTAGCCATTTACAGAAATATAGGAACCATTTGAAGAGATCAGCCGATGAAACAAAACGTGGGAGGAAAAAATCAAAGTTGAGTGTTAGCTTTCAAGCTGATTGGATTGACCAGGACGGGAGTCGTGACTTTCAAGCTGAGCAGAATTATGACTTTGAAGCTGAGTGGATCGATTGCGGGACGGGATCCTACCTTCACAACCTTATGGTCTAG 870 0.4034 MALFTHNPSFPVGLKVIAIDHDITHLNTIQDMCNRFHYHVTKCSTASDAVNLLERKECFDVMLIDDHMPNMDAYHFVQHATEQLNIPVIMMSFDPTESSVMKSISYGACAYWTKPLYEEQFKNMWQHVVRKGLMENKELQINGSSEVQGVRKRGRDDDNSSNEDENGSNETNAKNARLSWSPKLHQRFLWAINQIGLDKAKPKLILKVMDVRDLTIGHVASHLQKYRNHLKRSADETKRGRKKSKLSVSFQADWIDQDGSRDFQAEQNYDFEAEWIDCGTGSYLHNLMV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0620 289 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 11 243 - -
Mal7g0620 289 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 175 229 IPR006447 GO:0003677
Mal7g0620 289 ProSiteProfiles Response regulatory domain profile. 15 129 IPR001789 GO:0000160
Mal7g0620 289 Pfam Response regulator receiver domain 16 123 IPR001789 GO:0000160
Mal7g0620 289 Gene3D - 171 233 - -
Mal7g0620 289 SUPERFAMILY CheY-like 13 142 IPR011006 -
Mal7g0620 289 SMART REC_2 14 125 IPR001789 GO:0000160
Mal7g0620 289 MobiDBLite consensus disorder prediction 140 177 - -
Mal7g0620 289 Gene3D - 12 137 - -
Mal7g0620 289 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 243 IPR045279 GO:0009736
Mal7g0620 289 SUPERFAMILY Homeodomain-like 174 232 IPR009057 -
Mal7g0620 289 CDD REC_typeB_ARR-like 16 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0620 Mal-Chr7 16703481 16719575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0620 10 250 Response Regulator Gene Family AT4G31920 36.585 4.77e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal7g0620 Response_reg 4.2e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0620 - K14491 mtr:MTR_4g021790 406.371