Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0614 ATGGTAACTGTTCCTGAGTTTTCTGAAATTTCACAAGTTTCATCTGAAAAAAGTTTTTTTAACATTAAGGCTAAGGTGATTAGAATGTGGAAGGTCTCAGATTTTAACAGAAACACAGTACCTTTTTCAATTGAAATGGTTTTAGTTGATGCTGCTGGTGGTAGAATTCATGCCACTATTAAGAAAACTTTGATTTACAAATTTAAGAACCAAATCTTTGAGGGAAGAAGCTACAGTTTTGAAAACTTAGGAGTGGCTAACAATGGCGGTTGTTACAGAACTACATGTCATAGTTACAAACTTAATTTTCAATTTAGCTCTAAAGTTCAGGTTCTGCCAACTTTGAATATCACTGTTTCTCCTTATTTGTTTGTTGCAATCTTAGAAGTTGTGTCTGGTGCTTATGATACTGATCATTTTTTTTACAATATCATTTTCTACATTTCAGACCTTATTGGAGTTTTATGTGGTGTTGGAAATGAAAGAGAATTGACTAAGGATGGGAAGACTACCAAGTTGAATGTTATTGAGCTTGAGGCTGATGGTCATAGGATACAGTGTACTCTTTTTGGCACTTATGTGGATGATCTGAATAACTTCATTGCATCCGGTGATATCCAAAATGCCATTGTCATTGTCCAGCTTGCAAAAGCTAAGAGCTTCCAAGATAGGATTCATGTTCAAAATTGTCTCAACTGTACCAAATTGATCTTTAACCCAACCTGTTCAGAAGCAATGACCATTAGGAGCAGGATTTCTGAAGCTGTTGACATTGTCTCTCCAATGACATTAACCCAAGTAGCCCCTGAATCTAGGATTGAACCTTTGGATGAGTTTCTCTACAATACTCCAAGAACAACTATGCAAGGCCTTAAAGATGCCTGCACTAACTCTGTTTATGTAGTGCTTGGAACTGTTAAGAGGGTTGTCAACGGAGAAAACTTTTGGTATACGGCTTGCGTTTGCAATAAGGCTGTTGTTCCGGACTCTGAATTGTTCTTTTGTGAGAAATGTGATAGACATGTTAAGAAAGTTGTTCCTAGGTTCTGCTTGAGGATTAGAGCAATAGATCACACTGACACTGCTACTTTGGTTGTGTTTGATCGAGATGCGACTTCGTTATTCAATATGAGCTGTGCTGATATGATCCAGCAAAATGAAAATGCTATTGCTTTGGGTGAAGTTCCTCTTCAAATTGCTGAATTGGTTGAAAAAACTTATCTGTTTAAGGTTGAAACCAAGCAATTTTTAGTACCAGATTTGAACAATCTTTTCGTGTCAGAAAGATTTGTGCTGATCCTAATATCATCAGAGAGTTTAAATCCAAGTGGGATAGAGAGGAGGCTTCTTTTAACAAAATTACAAATGAGGGTGATTCATTGA 1383 0.3659 MVTVPEFSEISQVSSEKSFFNIKAKVIRMWKVSDFNRNTVPFSIEMVLVDAAGGRIHATIKKTLIYKFKNQIFEGRSYSFENLGVANNGGCYRTTCHSYKLNFQFSSKVQVLPTLNITVSPYLFVAILEVVSGAYDTDHFFYNIIFYISDLIGVLCGVGNERELTKDGKTTKLNVIELEADGHRIQCTLFGTYVDDLNNFIASGDIQNAIVIVQLAKAKSFQDRIHVQNCLNCTKLIFNPTCSEAMTIRSRISEAVDIVSPMTLTQVAPESRIEPLDEFLYNTPRTTMQGLKDACTNSVYVVLGTVKRVVNGENFWYTACVCNKAVVPDSELFFCEKCDRHVKKVVPRFCLRIRAIDHTDTATLVVFDRDATSLFNMSCADMIQQNENAIALGEVPLQIAELVEKTYLFKVETKQFLVPDLNNLFVSERFVLILISSESLNPSGIERRLLLTKLQMRVIH* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0614 460 PANTHER REPLICATION FACTOR A 1, RFA1 24 386 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal7g0614 460 Pfam Replication factor-A C terminal domain 304 415 IPR013955 -
Mal7g0614 460 Gene3D - 6 111 IPR012340 -
Mal7g0614 460 SUPERFAMILY Nucleic acid-binding proteins 6 114 IPR012340 -
Mal7g0614 460 CDD RPA1_DBD_C 299 415 IPR013955 -
Mal7g0614 460 Gene3D - 116 258 IPR012340 -
Mal7g0614 460 Gene3D - 281 437 IPR012340 -
Mal7g0614 460 SUPERFAMILY Nucleic acid-binding proteins 148 255 IPR012340 -
Mal7g0614 460 CDD RPA1_DBD_A_like 22 109 - -
Mal7g0614 460 SUPERFAMILY Nucleic acid-binding proteins 296 415 IPR012340 -
Mal7g0614 460 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 24 386 - -
Mal7g0614 460 CDD RPA1_DBD_B_like 150 251 - -
Mal7g0614 460 Pfam Domain of unknown function DUF223 45 137 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0614 Mal-Chr7 16228682 16230823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0614 313 450 Core DNA Replication Machinery Family AT5G45400 27.517 1.25e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0614 - - mtr:MTR_4g036240 478.018