Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0606 ATGGTTATGCTTCCTAATGTCAAAAATTCACATATGGAGGAACTTATTTGTGTTGAAAATCGTCAAGATGACATATTGAAACTTGATGACGAACTCATTGAACTAAGTGACGATTCGTTACTTGTAATGGAAGATTCATCTAGTGAAGATCAAATGAATTCATTTAGATATCAAGAATTTGAAGAAATTATTGCGGATAAGTTTCAAGGTGAAACATCACAAAATAGAAAAGAAGTAGAATTGTCATTTACTAAATTGTTGGAGGTGGATGAGCCTGTGGCTGTGTGGTTCAAGTGGAGAGGGAAGTGGCATGCAGGCATCAAATGTGAAAGGGCTGATTGGCCATTATCAATGGTGAAAGCCAAACCAACTGATGATAAGCAGAACAAATATTTTATCATTTTTTCTCCAGAAACAAGGAATTATTCATGGGTGGATATGCTTCTCATTCAATCAATTGATGAGTTTCCTCAACCTATAGCATATAAAACTCATCAAGAAGGATTGAAATCGGTACAAGACTTGGCGATTGCGCGAGAATTTATAATGCAAAAGCTTGCCGTTGAAATGCTCTACATTGTTGATCAGATTCATCTTAATGCTTTGATAGAAGATGCTCGTAATGTGATGGTTTGGAAGCAGTTTGCTACGGAAGCTTCTCATTGTCGTCGTTATTCAGATCTTGGAAGAATGCTTCAGAGGCTGCAAAATAACATAATGCAACACTATATGAAAGGTGATTGGAAACAACATTCCTCTGAGTCTTGGGCTGAAAGATGTCAGAGTGCAAACACTGCTGAAATAGTAGAATTGCTTCAGGAGGAACTTTTCGATTCTGTTTTGTGGAATGATGTCCACGCTCTTCGTGAAGCACCAGCACAACAAAAAATAGGTTATGAAGGGAAAACATGGAGCGATGATGTAATGAAATGGTTTTCCACACTTCCTTCTGTTTCTGGCAGCAACAACACACAACAACATGCTTCTAGCTCTGATGGTTTGCACCAAGTAGGCCTTCAATTTGGAAGCAAAAGGCCTAAACTTAAAGTTCTCCGCGCATATACACATTCTAGACATGAAGGTATTGTGGAGGTACCTGTGGAAACCGAGCTTCCTAGTCAATTGATCAGTCCAATGAGTGAAATTGCAGTCAATCCTGTAGATTCTGAGATCATGTTAAACAATGGAATAGTATCAAGGCATGTGGATGAAATGGATATTCAAACATTTGTAGAACCTCGTACTAAGGAAGGTACTGAGGATCGTCAATGTCAAGCATTTATTCAAGCCAAGGGAAGGCAGTGTGTGAGAATGGCAATCAGTAATGATATATATTGTTGTGCACATTTCTCAAGGAAAAAAGAAAAATGTGTTAAAGTTCTTACTCCTACTTGTGGAGGTATAACTGCTGCTGGTACTAAATGTAAGCATCATTCCCTTCCCAACTTTGCATTTTGCAAGAAACATTTGCGCAATGCTGACACGAATAAGATCTCAAATTTAAACCTTCGTACATTGAAGAGGAAAGCTGAAGAAAGTTGCATTGGTTCAAAGAGCCAAATTTGCAATGATTTGGTGTTGGTAAATCGGGAAAGTCCAATGGAGATCGATCCAATGTCGACCATTGATGATGATGATTCTTTCTCCGCAAAGAACATCTTAGGTGAAATCCTCATGCTTTCCGGAAATTGTCACAATGAAATTGAGACTGGTAATAAGTGCAAGATTTGCTTTGAAGAATTTTCAAATGACCGTACACTTGGCGATCATTGGATGGAAAATCATAAAAAGGAAGCACAGTGGTTGTTCAGAGGTTATGCTTGTGCCCTTTGTTTCGATTCCTTTAGTAACAAAAAACTATTGGAATCACATGTTCAGAAGAGACACAACACGCCTTTTGTTGAACAATGCTTGCTTTTACTATGCATTCCCTGTGGTAGTCATTTCAGTAATATGGAGGAATTGTGGTTGCATATTAAGTCAGTGCACCCTTCTGAATTTAAGCTTCCAATAACTCCTGAGAATCTAACTTCGTCTACCGGTGACGATTCTTCAAAAATACTTGAGCAGGGAAATGAAGCTTCTCGGGAAAATAATAATTCCGAGAATCCGAGCAGTTCACGAAAGTTAAGTTGTAGATTTTGTGGATTAAAATTTGATTTACTGCCTGATCTCGGTCGCCATCACCAAGCTACGCATATGGAGCGCAATCTTTCTCGCAGGCATTTGGCGAAAAAGGGAGGTGTTACACTTGGCAGTCCTAAATTCAAAAGAGGTTTGGCTAAATTACTTGAGAGGGGGGAAACATCCATGCAGCAGTCTCATGTGAGCAAGACAACATGTACTGCTGAATTGGAAGAACCTCAATGCCTAGAAGTTGCTAGTATTTTGTCTTCTGATATTCACGAGACTGAACCCCAACTAAACAATCTAGATATTTTATCAATCGCTTACACTGCATGCTGCAAAGTTAATCTTGAAGCCTCATTGAAGGAGAAATATAGATATTTTCCAGAAAGGATCTATTTGAAGGCAGCAAAACTTTGCAGGGAGAAAGATATTCTTGTCATTTGGCATCAGGACAGGTTCATTTGTCCAAGAGGATGTAATGCACTGCATGAACAAAACCTGATGGAAAAAACTGCAAATGCATCAGATCTTGCATGTATTGAAATGGAGCATGATGAGTCTCAATCCATCATCAATTCAAACCATATAAGATTAGGGTCATCACAAAAGGATCTAGTGTTATGTGATGACATAAGCTTTGGGATCGAATCAACTCCAGTCATTTGTGTTGTAGATCAACAAATTCTTAACTCCCTTTTTGAGATAGAGCAACATATAAGAATTCCTAGACCTTGGGCGAGCTTTACCTATGTCAAAAAATCGATGATTGGTTGTTCACCTAGTCTTGATTATGAGGTATTTAAAGTTGACTTAATTTTTATTTGA 2955 0.3834 MVMLPNVKNSHMEELICVENRQDDILKLDDELIELSDDSLLVMEDSSSEDQMNSFRYQEFEEIIADKFQGETSQNRKEVELSFTKLLEVDEPVAVWFKWRGKWHAGIKCERADWPLSMVKAKPTDDKQNKYFIIFSPETRNYSWVDMLLIQSIDEFPQPIAYKTHQEGLKSVQDLAIAREFIMQKLAVEMLYIVDQIHLNALIEDARNVMVWKQFATEASHCRRYSDLGRMLQRLQNNIMQHYMKGDWKQHSSESWAERCQSANTAEIVELLQEELFDSVLWNDVHALREAPAQQKIGYEGKTWSDDVMKWFSTLPSVSGSNNTQQHASSSDGLHQVGLQFGSKRPKLKVLRAYTHSRHEGIVEVPVETELPSQLISPMSEIAVNPVDSEIMLNNGIVSRHVDEMDIQTFVEPRTKEGTEDRQCQAFIQAKGRQCVRMAISNDIYCCAHFSRKKEKCVKVLTPTCGGITAAGTKCKHHSLPNFAFCKKHLRNADTNKISNLNLRTLKRKAEESCIGSKSQICNDLVLVNRESPMEIDPMSTIDDDDSFSAKNILGEILMLSGNCHNEIETGNKCKICFEEFSNDRTLGDHWMENHKKEAQWLFRGYACALCFDSFSNKKLLESHVQKRHNTPFVEQCLLLLCIPCGSHFSNMEELWLHIKSVHPSEFKLPITPENLTSSTGDDSSKILEQGNEASRENNNSENPSSSRKLSCRFCGLKFDLLPDLGRHHQATHMERNLSRRHLAKKGGVTLGSPKFKRGLAKLLERGETSMQQSHVSKTTCTAELEEPQCLEVASILSSDIHETEPQLNNLDILSIAYTACCKVNLEASLKEKYRYFPERIYLKAAKLCREKDILVIWHQDRFICPRGCNALHEQNLMEKTANASDLACIEMEHDESQSIINSNHIRLGSSQKDLVLCDDISFGIESTPVICVVDQQILNSLFEIEQHIRIPRPWASFTYVKKSMIGCSPSLDYEVFKVDLIFI* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0606 984 Gene3D Classic Zinc Finger 603 686 - -
Mal7g0606 984 Pfam Zinc finger C2H2-type, 3 repeats 608 734 IPR040689 -
Mal7g0606 984 PANTHER SET DOMAIN PROTEIN 2 978 - -
Mal7g0606 984 SMART c2h2final6 710 733 IPR013087 -
Mal7g0606 984 SMART c2h2final6 606 629 IPR013087 -
Mal7g0606 984 SMART c2h2final6 640 663 IPR013087 -
Mal7g0606 984 SMART c2h2final6 572 595 IPR013087 -
Mal7g0606 984 ProSitePatterns Zinc finger C2H2 type domain signature. 712 733 IPR013087 -
Mal7g0606 984 ProSiteProfiles Zinc finger C2H2 type domain profile. 606 629 IPR013087 -
Mal7g0606 984 ProSitePatterns Zinc finger C2H2 type domain signature. 608 629 IPR013087 -
Mal7g0606 984 ProSitePatterns Zinc finger C2H2 type domain signature. 574 595 IPR013087 -
Mal7g0606 984 ProSiteProfiles Zinc finger C2H2 type domain profile. 640 668 IPR013087 -
Mal7g0606 984 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 2 978 - -
Mal7g0606 984 ProSitePatterns Zinc finger C2H2 type domain signature. 642 663 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0606 Mal-Chr7 16060096 16080500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0606 600 973 C2H2 Transcription Factor Family AT2G23740 39.141 1.90e-76 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g0606 zf-C2H2_3rep 8.7e-56 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0606 - - mtr:MTR_8g078490 1335.47