Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0604 ATGTTGAATCGTGGGTCAAATGTTTCTGCTGAATTGGGTGGTTGTTCAGATGAAGAACTATGGAAGGCAATTGCAGGACCATTGGTGGATGTACCCTGTGTTGGTCAAAGGGTTTTCTATTTCCCTCAAGGGCACATGGAACAATTAGAGGCTTCCACTAATCAAGAACTGAATCAGAGGAGTCCTTTGTTGAAACTTCCTACAAAGATCCTTTGTCGCATCGTGAATATCCATTTACTGGCTGAGCAAGAAACAGATGAAGTTTATGCACAGATTACTTTGGTGCCAGAATCTAATCAAGATGAGCCTACAAGCCCTGATCCGTGCATCGATGAACTTCCAAGGCCAAAAATTCACTCATTCTGCAAAATCTTAACCGCTTCGGATACCAGCACACATGGTGGCTTCTCTGTTCTCAGGAAACATGCCACAGAATGCCTTCCTCCTATGGACATGTCCCAACCAACACCAACTCAAGAGTTGGTTGCCAAGGATCTTCATGGTTATGAGTGGCGCTTTAAGCATATATTTAGAGGTCAGCCGCGCCGTCACCTTCTTACCACTGGATGGAGTACTTTTGTGACTTCCAAAAGATTAGTTGCTGGAGATACCTTTGTGTTTTTGAGAGGGGAAAACGGGGAATTACGTGTTGGAGTGAGGCGTCTTGCTCGTCAGTCAAGTAGCATGCCATCATCTGTGATTTCTAGCCAGAGCATGCACCTAGGAGTTCTTGCAACTGCCTCTCATGCTGTTGCAACACAGACTCTCTTCGTTGTATATTATAAGCCGAGGACAAGCCAGTTCATTGTAAGCGTCAACAAGTACTTGTCGGCTGTCAATAATAAGTTTGCTGTCGGCATGCGGTTCAAGATGAGGTTTGAGAGTGATGATTCTGCTGAGTCTGATAAAAGATTTTCCGGTACCATAGTTGGAGTCGAAGATATTTCTCCCCATTGGGTAAATTCAAAATGGCGATCACTTAAGGTTCAATGGGATGAACCTGCAGCTATTACAAGACCTGACAGGGTTTCACCGTGGGAGATAGAACCCTTTGTTTCTTCAGCTTCTACACCGTCAGTTCAACCTACGGTTGCAAAGACTAAAAGGCCTCGACCACCGAGTGAAATTCCCGACGTTGACACAACATCAGCTGCCTCTATTTTCTGGGATGCTAGGCTGTCACAAACCGATATGACACAACGTAGTGTTTTAGCCGAAAGCAGAAAAGGTGATGGCACTGGTATGTGGCATATTAAGCAAACTGATATGATGAATACTAAAAGCAACAACAACGCTATATTGAGGAATCATACAGACGGAAGTTGGCTATCATCTCCCCGTTCTAGCTGTCCTTCTCATTTGCTTCACGACACAACCGATGATAGCAAGAGTGTCTCAGCTTGGCCATTTTCACAGTCTCAATCATCTATAGTGAACGTTGATCGTGTGCTCGATCAAGTTGATAATAACAACAAAGTCGAGACTCCTACAAGTTATCGATTGTTTGGAATTGATCTTATTAATCATTCAAAAAATTCAGCTGCTGTAGAAAAAGCATCTTCACATGCAGTCAACGGTAACGGAGTTACCACTGAAGTTAGTTCCTGCACCGTGTCAAGTACTGATACTGGCCGTAAGTCTGACATCTCGAAGGCTTCTTTTGAGAGGAAACAAGAACCACAAGTATCACCAAAGGAGACTCAGAGCAAGCAAATTTGTAGCAGAAGCCGCACCAAGGTACAAATGCAGGGTGTTGCAGTTGGTCGCGCTGTGGATTTGGCAATGTTGAATGGGTATGATCAACTTATTGGTGAATTGGAAGAGTTGTTTGACATCAAGGGACAACTTCAACACCGGAATACATGGGAAATTGTCTTCACCGATGACGAAGGAGATATGATGCTTGTTGGAGATGATCCATGGCCTGAGTTTTGTAACATGGTAAGAAGAATCTTCATTTGTTCCAGCCAAGATGTGAAGAAGATGAAAACAGGAAGCAAATTACCTATCTCTTCTTCGATCGAAGAAGGAACTGTAATAAGCTCAGACACAACCGAAAGATGA 2064 0.4365 MLNRGSNVSAELGGCSDEELWKAIAGPLVDVPCVGQRVFYFPQGHMEQLEASTNQELNQRSPLLKLPTKILCRIVNIHLLAEQETDEVYAQITLVPESNQDEPTSPDPCIDELPRPKIHSFCKILTASDTSTHGGFSVLRKHATECLPPMDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRLARQSSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIVSVNKYLSAVNNKFAVGMRFKMRFESDDSAESDKRFSGTIVGVEDISPHWVNSKWRSLKVQWDEPAAITRPDRVSPWEIEPFVSSASTPSVQPTVAKTKRPRPPSEIPDVDTTSAASIFWDARLSQTDMTQRSVLAESRKGDGTGMWHIKQTDMMNTKSNNNAILRNHTDGSWLSSPRSSCPSHLLHDTTDDSKSVSAWPFSQSQSSIVNVDRVLDQVDNNNKVETPTSYRLFGIDLINHSKNSAAVEKASSHAVNGNGVTTEVSSCTVSSTDTGRKSDISKASFERKQEPQVSPKETQSKQICSRSRTKVQMQGVAVGRAVDLAMLNGYDQLIGELEELFDIKGQLQHRNTWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMKTGSKLPISSSIEEGTVISSDTTER* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0604 687 SUPERFAMILY DNA-binding pseudobarrel domain 110 250 IPR015300 -
Mal7g0604 687 MobiDBLite consensus disorder prediction 526 547 - -
Mal7g0604 687 CDD B3_DNA 119 221 IPR003340 GO:0003677
Mal7g0604 687 PANTHER AUXIN RESPONSE FACTOR 18 675 - -
Mal7g0604 687 Pfam Auxin response factor 247 328 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal7g0604 687 Pfam AUX/IAA family 557 659 IPR033389 -
Mal7g0604 687 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 675 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal7g0604 687 MobiDBLite consensus disorder prediction 526 575 - -
Mal7g0604 687 MobiDBLite consensus disorder prediction 357 379 - -
Mal7g0604 687 Gene3D - 118 222 IPR015300 -
Mal7g0604 687 MobiDBLite consensus disorder prediction 548 563 - -
Mal7g0604 687 SUPERFAMILY CAD & PB1 domains 576 651 - -
Mal7g0604 687 SMART B3_2 121 223 IPR003340 GO:0003677
Mal7g0604 687 Gene3D - 282 357 - -
Mal7g0604 687 Pfam B3 DNA binding domain 121 221 IPR003340 GO:0003677
Mal7g0604 687 Gene3D - 571 663 - -
Mal7g0604 687 ProSiteProfiles PB1 domain profile. 575 656 IPR000270 GO:0005515
Mal7g0604 687 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0604 Mal-Chr7 15968895 15973416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0604 1 668 B3 DNA Binding Superfamily AT4G23980 59.226 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal7g0604 AUX_IAA 3.3e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0604 K14486 - gmx:100779003 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1993 3 82032892 82037931 Mal7g0604 7 15968895 15973416 PCT