Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0588 ATGGAACAGGATCAATGTTGGATTCAAACAAAGAGAAAGTACTCAATGAGTAGTTCCAATCTTGCTAATTCATTAACTAACCCTTCTTCTTCTTGTTATGGTGATTCATGGGAAGAACAAGCTTTTGCTGAAGATGCAGCTGCAGGGTCCCTTGGTGGATGTATATGGCCACCAAGATCATATTCTTGTAGCTTTTGTAGAAGAGAGTTTAGGTCAGCACAAGCATTAGGTGGACATATGAATGTTCATAGAAAAGATAGAGCAAGACTCAAACAACAACCACAAAATGATCAAACTCTTTATCATAATCATCATCATCATCATGAGGTTGAAATTGATACTCATCATCTTCAAAAGCCACTACAAAGTGGTTATAATAATAACCTATTCCCTAATTCTCATATTTGTGGTTTGGTTTATAATAAAACTAACCCTAATTCTCATCTTGATCATTTTGTTTGTTCAACTTCATCACCCTCTTCAGCTTCTAAGGCGGCGGCGTTATTTGGAGATGAAACCCTAATTTCTCCTTTCAATTCTTCTGAATCATGGAGAAATTTATCTGGAGATGATAGATTATGTTCAACGAAGTTTCAACTTGAAGTTGATAATATTAATCAAAAACACTCCAAAGGAATTATGGATTCTAGGTTTAGAGGTAAAGGGGGAAATGAAGATGATGATGATGAAAGTGATGTAGCTATGAGCTTGAATTTGGTTTTGTGTAGAACTCATCCACTTGTTGAATTTGAGAGTACTAAAGAAGAAGATTTCAATTGCAAGAAGAGGAAAAAATATCCTTCATCAAATCAATTATTCTCAAATTCAAGCACTTTTGATAAACAAGAACCTATGCAAGCAAAGATGTTTGAGATTAACCCTAATTCAAATGAGGAGGTAGATCTGGAGTTAAGGCTTGGTACAAGGTCCAAGGTATAG 939 0.3514 MEQDQCWIQTKRKYSMSSSNLANSLTNPSSSCYGDSWEEQAFAEDAAAGSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQQPQNDQTLYHNHHHHHEVEIDTHHLQKPLQSGYNNNLFPNSHICGLVYNKTNPNSHLDHFVCSTSSPSSASKAAALFGDETLISPFNSSESWRNLSGDDRLCSTKFQLEVDNINQKHSKGIMDSRFRGKGGNEDDDDESDVAMSLNLVLCRTHPLVEFESTKEEDFNCKKRKKYPSSNQLFSNSSTFDKQEPMQAKMFEINPNSNEEVDLELRLGTRSKV* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0588 312 Gene3D Classic Zinc Finger 58 121 - -
Mal7g0588 312 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Mal7g0588 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Mal7g0588 312 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 311 - -
Mal7g0588 312 Pfam C2H2-type zinc finger 61 85 - -
Mal7g0588 312 PANTHER OS07G0101800 PROTEIN 1 311 - -
Mal7g0588 312 SUPERFAMILY beta-beta-alpha zinc fingers 58 88 IPR036236 -
Mal7g0588 312 SMART c2h2final6 61 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0588 Mal-Chr7 15478435 15479373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0588 28 101 C2H2 Transcription Factor Family AT2G37740 71.622 8.43e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0588 - - mtr:MTR_4g021270 527.324