Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0552 ATGCTGCATGTTATAGAACATTGCCAAGTTGCTATAGTTGTATTTTCAATAAACTATGCTAATTCAACACGGTGTCTTCAAGAATTAGAGAAAATAACAGAATCTTGCCGAACTTCAGATTTGATTGTTCTACCTGTGTTCTATGATGGTGTCTATCCCTCAAATGGAAGTTTGAAGAACGGTATGTTTGGAGAGGCTTTTCATGATTTTCTGGATAGAATCTATAACAAAGAAGACAAGTTCATGGGTTGGGTGGCAGGGATCAGTAAAGGTTATAAATATTCAGGACCAAGACATTTCTTAGTCAAAAACTTATACAGCGAAGAAATTCAACATATTAAGAATGTAGTTGACCGTGTGATTTGTGTGCTAAACAAGAAGATAAGCTTGTCCAGTGCTTTCTATATAGTGATTGTAAAATCTAGTTCAAAATGTCCTCTCCTACTAGGGATATGGGGTATGGCAGGAATTGGTAAATCAGCCATTGCCGAGGCCATTTATGATCGGATTGGTCCCTATTTTGAAGACAAGTGCTTGCTCAATAAAGTCAGGGTAGTTTGGGAAAAAAGTAATGGTCAAGTTTCTTTACAAGAGAAACTTCTTTTTGATGTCGACAAAGCAACTAAAATAAAGATTCCTACCATTGACTCGGGAAAAGAGATTTTAAAAGAAAGACTTCGACATAGACGGGTACTTCTTGTACTTGACGATGTTGGTAAATTGGAGCAGCTACATGCTTTGTGTGGAAGTCGTGAATGGTTTGGCGAAGGTAGCAAAATTATCATCACAACAAGAGATAGACATCTGCTCAAGGAGCATGGAGTTGACCATATATATAGAGTGAAAGAACTGGACGAAAGTGAGTCACTTGAGGTTTTGAAACGGGGTGCATTCAGCCAGGCTACAATTTCACCAGAAGATTTTGTTGAACTTTCTAGAGAGGTAGTTGTCTATTCTGGGGGATTGCCTCTTGCTCTTCAAAATCTTCGGTCCATTTTGCATGGAAAAGAACCACGTCAGTGGAAGGGTCTATTGAGGAGTCTGGAAAGATTATCCATTCCATTTCCACAACTACTTGAAGCTCTAGAGAAGAGTTTTCATGATTTGACTTGTTTCTTTAATGGGATGGACCAAAATGATGTACTCCGAACATTAAATAGGCCAATACAATGCACAACTCTACAAATAAGTCTCCTTGAAGACAAGAGCCTTGTATCCATTGATGAGACTAACAAGCTTCAAATGAATGTTATGCTACAAGCCATGGCAAGAGATATCATTAAGAGGGAATCAAGTAATATGACTAATCAGCCAAAGATGTACGATGTGTTCTTGAGTTTTAGAGGGGAAGACAGTCGGGCGAAATTCATTTCCCATTTGTATTCCTCTCTTCAAAATGCGGGGATTTATGCTTTCAGAGATGCTGAGATTCAACGAGGAGATCATATCTCAATCTCACTGTTGCAAGCAATTGGACGGTCTAGAATTTCTATTGTTGTTTTGTCAATAAATTATGCTAATTCAAGATGGTGTATGCTAGAGTTGGAGAAGATCATGGAAATTGGCAGAACCAGTGGTCTGGTGGTTGTACCAGTGTTCTATGAGGTAGATCCCTCAGAAGTACGTCATCAAGAAGGTCAGTTTGGAAAAGCTTTGGAAGATCTTATATCAACAGTCTCACAGTGGATGAATCAACAAAGAGTAATTGGAGAAGAGAACTCTTTAATATTGGTGGCATAG 1740 0.3856 MLHVIEHCQVAIVVFSINYANSTRCLQELEKITESCRTSDLIVLPVFYDGVYPSNGSLKNGMFGEAFHDFLDRIYNKEDKFMGWVAGISKGYKYSGPRHFLVKNLYSEEIQHIKNVVDRVICVLNKKISLSSAFYIVIVKSSSKCPLLLGIWGMAGIGKSAIAEAIYDRIGPYFEDKCLLNKVRVVWEKSNGQVSLQEKLLFDVDKATKIKIPTIDSGKEILKERLRHRRVLLVLDDVGKLEQLHALCGSREWFGEGSKIIITTRDRHLLKEHGVDHIYRVKELDESESLEVLKRGAFSQATISPEDFVELSREVVVYSGGLPLALQNLRSILHGKEPRQWKGLLRSLERLSIPFPQLLEALEKSFHDLTCFFNGMDQNDVLRTLNRPIQCTTLQISLLEDKSLVSIDETNKLQMNVMLQAMARDIIKRESSNMTNQPKMYDVFLSFRGEDSRAKFISHLYSSLQNAGIYAFRDAEIQRGDHISISLLQAIGRSRISIVVLSINYANSRWCMLELEKIMEIGRTSGLVVVPVFYEVDPSEVRHQEGQFGKALEDLISTVSQWMNQQRVIGEENSLILVA* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0552 579 Gene3D - 1 84 IPR035897 -
Mal7g0552 579 SMART till_3 440 572 IPR000157 GO:0007165
Mal7g0552 579 Gene3D - 101 277 IPR027417 -
Mal7g0552 579 Gene3D - 283 370 IPR042197 -
Mal7g0552 579 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 431 IPR044974 GO:0006952
Mal7g0552 579 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 449 562 IPR044974 GO:0006952
Mal7g0552 579 ProSiteProfiles TIR domain profile. 1 78 IPR000157 GO:0007165
Mal7g0552 579 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 431 - -
Mal7g0552 579 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 449 562 - -
Mal7g0552 579 Gene3D - 435 574 IPR035897 -
Mal7g0552 579 PRINTS Disease resistance protein signature 225 239 - -
Mal7g0552 579 PRINTS Disease resistance protein signature 319 333 - -
Mal7g0552 579 PRINTS Disease resistance protein signature 148 163 - -
Mal7g0552 579 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 67 IPR035897 -
Mal7g0552 579 Pfam TIR domain 441 557 IPR000157 GO:0007165
Mal7g0552 579 Pfam TIR domain 3 90 IPR000157 GO:0007165
Mal7g0552 579 ProSiteProfiles TIR domain profile. 439 579 IPR000157 GO:0007165
Mal7g0552 579 SUPERFAMILY Toll/Interleukin receptor TIR domain 431 555 IPR035897 -
Mal7g0552 579 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 370 IPR027417 -
Mal7g0552 579 Pfam NB-ARC domain 147 350 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0552 Mal-Chr7 14820476 14822890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0552 2 433 WRKY Transcription Factor Family AT4G12020 29.425 3.03e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0552 - - cam:101511908 911.753