LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g0550	ATGCATGTTCTGCTGCAAGCCACAGCAAGAGATATCATTAAGAGGGAATCAAGTAATAAGACTAGTCAGCCAAAGATGTATGATGTGTTCTTGAGTTTCAGAGGGGATGACAGTCGTGCAAAGTTCATGTCACATCTTTATTCCTCTCTTCAAAATGCGGGGATTTATGTTTTCAAAGACGATGAAGAGATTCACCGAGGTGATCAAATCTCAATATCATTGTTGCGAGGAATTGGACAGTCTAGAATTTCTATCGTTGTTTTGACTACAAATTATGCAAATTCAAGATGGTGTATGCTAGAGTTGGAGAAGATCATGGAAATTGGCAGAATAAAGGGTCTGGTGGTTGTGCCAGTGTTCTATGAGATAGATCCCTCAGAAGTACGTCATCAGGAAGGTCGGTTTGGAAACGCTTTTAAAGAGCTGATATCGACAATCTCAGTGGATGAATCCACAAAGAGTAATTGGAGAAGAGAACTCTTTGATATTGGTGGCATAGCAGGGTTTGTACTCATAGATTCCAGGAATGAAAGTGCTGATATCAAGAATATTGTTGAGCATGTTACTCGATTGCTAGATAGGACAGAGTTATTCGTTGCTGAACATCCAGTAGGAGTAGAATCTCGTGTGGTAGCTGCAACCAAGCTATTGAACATCCAAAATTCAGAAGATGTTTTACTTCTAGGGATTTGGGGTATGGGGGGTATGGGAAAAACAACCATTGCCAAAGCCATTTATAATCAAATTGGGAGCAAATTTGAGGGTAGAAGCTTCCTTCTGAATATAAGGGAGTCTTGGGAGACATATACTAATCAAGTTTCACTACAGCAACAGGTACTTTGTGACGTTTACAAAACAACGACATTCAAGATACGTGACATCGAATCAGGGAAAAATATATTGAAGCAAAGACTTTCCCAGAATAGGGTGCTTTTTGTGCTTGATGATGTGAATGAATTGGACCAACTAAAGGCTTTGTGTGGAAGTCGTGAATGGTTTGGTCCAGGGAGTAGAATAATCATTACCACAAGAGATATTCATATTCTGAGATCGTGTAGAGTTGATCGAGTGTATGAAATAGAAGCAATGGACAAAACTGAATCTCTCGAGCTTTTTAGTTGGCATGCATTCAACCAAGCAAGTCCGATAATAGATTTTACTACACATTCAGAAGATGTGATTGCTTATTCAGGGAGATTGCCACTAGCACTTCAAGTCCTTGGGTCCTATTTGTCTGACTGTAAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAGATGTATTCCCCATGATCAAGTACAGAAAAAGCTGAAAGTAAGCTTTGATGGTTTAGATGATATAGAGAAAAGTATATTCCTCGATATAGCTTGTTTCTTTATCGGGATGGACAAAAATGATGCAATACAAATATTAAACGGGTGTGGATTTTTTCCTGATATTGGAATTAAAGTACTTGTAGAACGAAGCCTTGTAACTGTTGACAATAAGAACAAGCTTAGAATGCATGATTTGTTGAGAGACATGGGAAGACAAATAATTTATGAGGAATCACCATTTCATTCTGAGAAGCGCAGTAGGTTGTGGCGCCGTGAGGAAGTGTTTGATATATTATCAAAGCATAAGGGAACGGAATATGTCGAGGGTCTGTCTTTGGAGTTTCCAAGAAAAAATACAGTTTATCTGAATACTAAAGCATTTATGAAGATGAATAATCTTAGACTTCTTCAACTTGCTGGGGTACAACTTAATGGAGATTTTAAACATCTCTCCGGAGAACTTAGGTGGTTGTACTGGCATGGATTTCCCTCAACTTACACTCCTGCAGAATTTCAACAAGGAAGTCTAGTTGCCATCGAATTAAAATATAGTAATCTCAAACAAATATGGAAAAAGAGCCAGCTGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTTTGGATTTGACTACAACCCCAGATTTTTCATACTTGCCTAATCTTGAAAAGCTGGTACTCAAAGACTGTCCAAGTTTGTCTATGGTCTCCCACAGCATTGGATCTCTCCATAAACTTCTTCTTATAAATTTGACAGACTGCACAGGCCTTCGTAACCTTCCGAGAAGCATCTATAAATTAAAATCTCTAGAAACTTTGATTCTTTCTGGATGTTCTATGATTGACAAATTGGAGGAGGACTTGGAACAGATGGAATCATTGACAACCTTAATTGCGGATAAGACTGCTATAACAAAAGTGCCCTTTTCAATAGTTAGATCCAAAAGCATTGGATATATTTCTTTATGTGGCTTTGAAGGATTTTCACGTGATGTATTTCCTTCTCTAATTCTGTCTTGGATGTCACCATCAAATAATGTGACATCCCTAGTTCAAAGATCCATGTCCACATTATCTCTTGGTGCTTTCAAGGACCTTCTAAAGCTTCGAAGTGTTTGTGTGGAGTGTGGCTCAAAACTACAACTAAGTCGAGATGTAGCAAGAATTTTGGATGTATTAAAAGCCACAAATTGTCAGAAAATGGAAGCAAGTGCAAGTGCAACTACATCACAAATCTCTGATATGTATCCTTCTCCTTTAGTTGATGATTGCCTTGGTCAAGTTCGCACTTCAGGGTCAAATAATAATAACTTGAAATCTTTCCTAATTCAAATGGGAACCAAATTCCAAGTCCCTAATATTGTGAAAGACAACAATTTACAGACTGCAGATGGGACACTGGATTCATTTTTGCTCTCCTGTGACAATAAATCTGATTGGTTAACCTTCAGTTGCAAAGGTTGTTCTATAGTATTTGATGTCCCAACAACGAAGGGGAGTGACCTGAAGAGTATGACATTGTCCATCATCTATTGTTCTTCCCCGGACAACATAACATCAGAAGGTTGTCAAGGTGTGTTGATCATAAATTACACAAAGACAACCATTCAACTCTATAAAAGAGATACACTAGCCTCCTTTGAGGATGAGGATTGGAAGAGCATAACATCAAACCTAGAACCTGGTAACGAAGTAGAGATTATAGTACTTTTTGGAGAGGGATTCATTGTAGAGAAGACAACAATATATCTCTTATATGATGAATCAATGAACAAAGAAATGGTACACTGCGATGCAGTAGGCGAGGTGGATGTTACTGTTTCTGGTCATGACGGTACGAATGTTAGTGTTTCTGGTGGTTATAACACTGATGTGCCAATGGGCAACAATGTCATCGGTCTTCGTCAAGATGAAAATATAAGTGAAGATAAGCACTTGCATGCAATGGATAAGAATTCTGGTGATGATGCCATGGCAACAAATAAGAAATGTGCTTGCTTTTTCTGGTGGCGGTGA	3336	0.3828	MHVLLQATARDIIKRESSNKTSQPKMYDVFLSFRGDDSRAKFMSHLYSSLQNAGIYVFKDDEEIHRGDQISISLLRGIGQSRISIVVLTTNYANSRWCMLELEKIMEIGRIKGLVVVPVFYEIDPSEVRHQEGRFGNAFKELISTISVDESTKSNWRRELFDIGGIAGFVLIDSRNESADIKNIVEHVTRLLDRTELFVAEHPVGVESRVVAATKLLNIQNSEDVLLLGIWGMGGMGKTTIAKAIYNQIGSKFEGRSFLLNIRESWETYTNQVSLQQQVLCDVYKTTTFKIRDIESGKNILKQRLSQNRVLFVLDDVNELDQLKALCGSREWFGPGSRIIITTRDIHILRSCRVDRVYEIEAMDKTESLELFSWHAFNQASPIIDFTTHSEDVIAYSGRLPLALQVLGSYLSDCKITEWQKVLEKLRCIPHDQVQKKLKVSFDGLDDIEKSIFLDIACFFIGMDKNDAIQILNGCGFFPDIGIKVLVERSLVTVDNKNKLRMHDLLRDMGRQIIYEESPFHSEKRSRLWRREEVFDILSKHKGTEYVEGLSLEFPRKNTVYLNTKAFMKMNNLRLLQLAGVQLNGDFKHLSGELRWLYWHGFPSTYTPAEFQQGSLVAIELKYSNLKQIWKKSQLLENLKILNLSHSLDLTTTPDFSYLPNLEKLVLKDCPSLSMVSHSIGSLHKLLLINLTDCTGLRNLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAITKVPFSIVRSKSIGYISLCGFEGFSRDVFPSLILSWMSPSNNVTSLVQRSMSTLSLGAFKDLLKLRSVCVECGSKLQLSRDVARILDVLKATNCQKMEASASATTSQISDMYPSPLVDDCLGQVRTSGSNNNNLKSFLIQMGTKFQVPNIVKDNNLQTADGTLDSFLLSCDNKSDWLTFSCKGCSIVFDVPTTKGSDLKSMTLSIIYCSSPDNITSEGCQGVLIINYTKTTIQLYKRDTLASFEDEDWKSITSNLEPGNEVEIIVLFGEGFIVEKTTIYLLYDESMNKEMVHCDAVGEVDVTVSGHDGTNVSVSGGYNTDVPMGNNVIGLRQDENISEDKHLHAMDKNSGDDAMATNKKCACFFWWR*	1112

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g0550	1111	SMART	AAA_5	224	364	IPR003593	-
	Mal7g0550	1111	Gene3D	-	19	190	IPR035897	-
	Mal7g0550	1111	PANTHER	RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED	33	1026	-	-
	Mal7g0550	1111	Coils	Coil	721	741	-	-
	Mal7g0550	1111	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	33	1026	IPR044974	GO:0006952
	Mal7g0550	1111	Gene3D	-	191	357	IPR027417	-
	Mal7g0550	1111	SUPERFAMILY	L domain-like	501	814	-	-
	Mal7g0550	1111	Gene3D	Ribonuclease Inhibitor	530	845	IPR032675	-
	Mal7g0550	1111	PRINTS	Disease resistance protein signature	304	318	-	-
	Mal7g0550	1111	PRINTS	Disease resistance protein signature	227	242	-	-
	Mal7g0550	1111	PRINTS	Disease resistance protein signature	705	721	-	-
	Mal7g0550	1111	PRINTS	Disease resistance protein signature	397	411	-	-
	Mal7g0550	1111	ProSiteProfiles	TIR domain profile.	25	192	IPR000157	GO:0007165
	Mal7g0550	1111	SUPERFAMILY	Toll/Interleukin receptor TIR domain	18	168	IPR035897	-
	Mal7g0550	1111	SMART	till_3	26	166	IPR000157	GO:0007165
	Mal7g0550	1111	Pfam	NB-ARC domain	214	436	IPR002182	GO:0043531
	Mal7g0550	1111	Pfam	TIR domain	27	189	IPR000157	GO:0007165
	Mal7g0550	1111	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	190	456	IPR027417	-
	Mal7g0550	1111	Gene3D	-	362	446	IPR042197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g0550	Mal-Chr7	14809051	14816360	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal7g0550	9	751	WRKY Transcription Factor Family	AT4G12020	32.026	1.08e-89	316

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g0550	-		-	cam:101511908	1769.21