Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0542 ATGTCTTCCTTCACTTCCTCCTCTGAAATCCGCCATGAATCTGAATCCACACCTACTTCTAGTACTAAAGATTCAAAGAAGAAGAGCTGCTACGATGTGTACTTGAGTTTCAGCGCAAAAGATTCACCAACTTTTGTTTTGAAACTTCATACGGCTCTTCGTTCATATGTTAAGGGATCTCTCGTTTTCATTGATGATAAGAAGTATGAAAGTGGAGATCAAGAAATAGCACCCTCAGAGTCATCGCTGAATGTTATAGGAGAGTGCAAAATTGCTGTAGTCGTATTTTCAAGAAATTATTTTAATTCAAGTTCGTGTCTTCAAGAATTGGCGAAAATAACAGAGTGTTGTCGAACTACACCTGGTCTTATTGTTGTGCCTGTGTTGTATCCCGTCTACCCAAGTTTGCAGGGAGGTATGTTTGGATGCGCTTTTCGTAATTTTGTGGATAAAGTCTGGATAAAGGAAATCTCTCAACATGAAGACAAGATCATGACTTGGGTGGCAGCGATTAGTAAAGCTACCAAACATTCAAAACATTTCGAAGACACAAACATGAACGAGTATGATTGTATCAAGATTGCAGTTGAACGTGTTATTATTGCGCTATATGGGAATATAGACTTCTCAAGTTCTTCCTTCTATACATTGAGTGTAAAGTCTGGTGTGCGAGATGTGATTCAACTATTGAAAGAATCAAGATTTCCTCTCCTGTTAGGGATATGGGGGATGGTAGGGATTGGTAAAACAAGCATTGCTCAAGCTATTTATGATCAGATTGGTCCATATTTTGAAGACAAGTGCATCATTAATGATGTCGGGGGAGTTTGGGAACAAGATAATGGTCAAGTTACTTTACAAGAGAAACTTCTTTTTGATGTCAAGATAGCCTCCAAGTTTGGAAAATTGACTTTAAAAGAAAGATTTCGACATAAAAGGGTACTTCTTATACTTGTAAATGTTAATAAACTGGAGCAGTTAAATGTCTTGTGTGGAAGTCATGAATGGTTTGGTGCAGGTAGCAAAATAATCATCACGGCAAGAGATAGACATCTACTCAAAGAGTACAAAGTTGACCATATATATAGAGTGAAAGAACTAGATGAAAGTGAATCACTTGAGCTTTTCAATTGGGGTGCATTCGGCCAAGCAAAAAGTCCTCCAGAAGATTTTGTTGAACTTTCGAGACTAGTAGTTGCTTATTCCGGGGGATTGCCTCTTGCTCTTAAAGCCCTTGGGAGGTTTTTGCATGGAAAGGAAGCTCTTCATTGGGAGGGTGTATTGAGGAGTCTCGAAAGATTTTCCATTCCAGCTCCACGATTACTAAAGGCTCTAGAAAGGAGTTTTAGTGATTTGAGTGATAATGAGAAACAAATATTCCTTGATATATCACATTTCTTTATTGGGATGAACCAAAATGATGTACTCCAAACATTAAAAAGGTCAACACAATGCAGAGTTCTTCAAATAAGTCTCCTTGAGGACAAGAGCCTTGTAACGATTGATAAGAATAACAAGATTCAAATGCATGTTCTACTACAAGCCATGGCAAGGGATATCATTAAAAGGGAATCAAGTAATAAGACTAATCATCTGAAGATGTACGACGTGTTCTTGAGTTTTAGAGGGGAAGACAGTCGTGCAAAGTTCACGTCACATCTTTATTCCTCTCTTCAAAATGCAGGTATTTTTGCTTTCCGAGACGATGATGAGATTCAACGAGGGGATCAAATCTCAATCTCACTGTTGCGAGCAATAGAACAGTCTAGAATTGCTATCGTTGTTTTGTCTGCAAATTATGCTAATTCAAGATGGTGTATGCTTGAGTTGGAAAAGATCATGGAAATCGGCAAATTTAGGGGTCTGGTTGTTGTGCCAGTGTTTTATGAAGTAGATCCCAGAGAAGTACGTCATCAAACAGGTTTGGTTGGAAAAGCTTTTGAAGAACTTATATCAACAATCTCAGTGGACGAATCCACAAAGAGTAATTGGAGAAGAGAACTTTTTGATATTGGTAGCAAAGCAGGGTTTGTTCTCAAAGATTCCAGGAATGAAAGTGCAGATATCAGGAATATTGTTGAGCATGTCACACATTTGCTAGATAGGACAGAGTTATTCGTTGCTGAACATCCACAACAGGTACTTTGTGATGTTTACAAAACAACACCATTAAAGATACCTAACATCGAATCAGGGAAAAATATGTTGAAGGAAAGACTATCCCAAAATAAGGTGCTTTTTGTGCTTGATGATGTGAATGAACTGGACCAACTAAAGGCTTTGTGTGGAAGCCACGAATGGTTTGGTCCGGGGAGCAGAATAATCATCACAACAATAGACTTGCATCTTCTAAATTTGGGTGAAGTTGATGAAGTGTATAAAATAGAAGAAATGAACAAAAGTGAATCTCTTGAGCTATTCAGTTGGCATGCATTTAAGCAACCAAGTCCAACAGAAGACTTTGCTACACATTCAACAGATGTGATTGCTTATTCAGGGGGATTGCCACTAGCACTTCAAGTTTTTGGATCTTATTTGTCTGACTGTGAAATAACAATGTGGCAAAAAGTTTTGAAAAAACTAAAAAGTATTCCGCATGATCAAGTGCAGAAGAAGTTAAAAGTAAGCTTCGATGGTTTAAAAGAAGATACAGAGAAACAAGCATTCCTTGATATAGCTTGTTTTTTTATTGGGAGGGACCGAAATGATGTAATACATATATTAAATGGATGTGGATTTTATGCTGATATTGGAATTAAAGTTCTTGTAGAGAGAAGCCTTGTAACAGTTGACAACAAGAACAAGCTTCAAATGCATGATTTGTTAAGAGACATGGGACGACAAATAATTAAGGAGGAATCACCATATGATCCGGAGAACCGCAGTAGGTTGTGGCATCCTGTCGAAGTGTTTGATATATTATCAAATCATACGGGAACAAAAGCTATCAAGGGACTGGCTATGGAGTTTCCAAGAGAAAACACATTTTGTCTAAATACCAAAGCATTTGAGAAGATGAATAAACTCAGATTACTTCAACTTGATGGGGTGCAGTTTAATGGAGATTTTCAATATCTTTCTAAAGAACTTAGGTGGCTGTACTGGCATGGATTTCCATCAACTTACGCTCTTATGCAACTTCAGCAAGGAAGTCTAGTTTCATTGGAGTTAAAATATAGTAAACTCGAACATCTCAATGATATTAGGAAGAGGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTTTGGATTTGACGGAAACACCAAAATTTTATTGGATGCCTAATCTTGAAAAGCTTATACTGAATGATTGTCCAAGTTTGACTGCAATCTCAGAAAGCATTGAATTTCTAAGGGAACTTCTTCTTTTGAATTTGACAAATTGCACAGGTCTTCGAAAACTTCCGAGAAACATCTACAAATTAAAATCTCTAGAAACTTTGATTCTTTCAGGATGTTCCATGATTGACAAATTGGAGGAGGATTTAGAACAAATGGAATCATTGACAACCTTAATTGCGGATAAGACTGCTATAACAAAAGTTCCTTTTTCAATAGTTAGATTAAAAAGCATTGGATATATTTCTTTATGTGGCTTTGAAGGATTTTCACGAGAAGTATTTCCTTCTTTCATTTGGTCTTGGTTGTCCCCGTCAAATAATGTGATATCCCTAGTTCAAACATCTTCCTCCATGTCATCTCTTGGTACTTTCAAGTACCTTCTAAAGCTTCAAAGTGTTTGTGTGGAGTGTTGCTCAAAACTACAACTATCTCAAGATGTAGCAAAAATCTCGGAGGTTTTAAAAGCCACAAATTGTCAGAAACTGGAAACAAGTGCAACTATAGCACATATCTCTGATATGTACCCTTCTCCTTTAATTGATGATTGCCATGATCAAGTTGGCACTTCATGGTCAAATAATTACTTGAAATCTTTCTTGATTCAAATGGGAACGAAACTACAAGTCACCAATATTGTCGAAGACAACACTTTACAGACATCAGATGGAACTTGTGATCCATTTTTGCTCCCTTGTGACAACAAATTTGTTTGGTTTACCTTCGGTTGCAAAGGTTCTTATGTAATATTTGATGTCCCAACATTGAAGGGGGGTAACCTAAAGGGTATGATATTGTTCGTTGTCTATCACTCTTCCCCAGATTACATAACATCAGAAGGTTGCGAAGGTGTATTGATCATAAATTACACAAAGACAACCATTCAAGCATATAAATCAGATACACTAACCTCCTTTGAGGTTGAGGATTGGAAGAACATAACATCAAATCTTGAACCTGGTAACAAAGTAAAGGTTATGGTTGTTTTTGGGGAGGATTTCATTGTTGAGAAGACTATTGTATCTCTCTTATATGATGAGCCAGTCGACAAAGAAATGGAACATTGTCAAGTAGTAGACGAGGAGAATGTTACTGTTTCTGGTCATAACGCTACGAATGTTAGTGTTTCTGGTGGGTATAGCACCATCAATCGCTTTGGAGAGGGAACGGTGAACCACATGCAGATCACCAGGCACACTGATGGGTTGTATGCTGATGTTGTGGGACCGGTTCTGCTAGTACCACATTATCCTGACCAGCCTGCGGAGGCAATAGAAGAGAAGATTCGTGCAGCTGAAGGTCAACCTGAGCTGCAAGCAGCAGCAGAAAGTGAGACCATTGGACCGTCCCTAGGAGCTCTGATTTTAGATGCCCTCAAAGAGCTCAGGGCTGATTTTGTCAAATTAGAGGAGCTTGAGGATGTCATTGCCCAGATACCGCGTTGGGCGAGTTATGAGTCCACTCATATCCTTCAGTTTCTTTTAATGTCGCTCCTCCTTTTGTTGTTTTATTTTTCTATAATGACTATGGTATCAGTTACTTCTGTTCATACCAGTTTCAGAGTTCTATCGTTATATGAATTCTTAATACATTGGTAG 4941 0.3785 MSSFTSSSEIRHESESTPTSSTKDSKKKSCYDVYLSFSAKDSPTFVLKLHTALRSYVKGSLVFIDDKKYESGDQEIAPSESSLNVIGECKIAVVVFSRNYFNSSSCLQELAKITECCRTTPGLIVVPVLYPVYPSLQGGMFGCAFRNFVDKVWIKEISQHEDKIMTWVAAISKATKHSKHFEDTNMNEYDCIKIAVERVIIALYGNIDFSSSSFYTLSVKSGVRDVIQLLKESRFPLLLGIWGMVGIGKTSIAQAIYDQIGPYFEDKCIINDVGGVWEQDNGQVTLQEKLLFDVKIASKFGKLTLKERFRHKRVLLILVNVNKLEQLNVLCGSHEWFGAGSKIIITARDRHLLKEYKVDHIYRVKELDESESLELFNWGAFGQAKSPPEDFVELSRLVVAYSGGLPLALKALGRFLHGKEALHWEGVLRSLERFSIPAPRLLKALERSFSDLSDNEKQIFLDISHFFIGMNQNDVLQTLKRSTQCRVLQISLLEDKSLVTIDKNNKIQMHVLLQAMARDIIKRESSNKTNHLKMYDVFLSFRGEDSRAKFTSHLYSSLQNAGIFAFRDDDEIQRGDQISISLLRAIEQSRIAIVVLSANYANSRWCMLELEKIMEIGKFRGLVVVPVFYEVDPREVRHQTGLVGKAFEELISTISVDESTKSNWRRELFDIGSKAGFVLKDSRNESADIRNIVEHVTHLLDRTELFVAEHPQQVLCDVYKTTPLKIPNIESGKNMLKERLSQNKVLFVLDDVNELDQLKALCGSHEWFGPGSRIIITTIDLHLLNLGEVDEVYKIEEMNKSESLELFSWHAFKQPSPTEDFATHSTDVIAYSGGLPLALQVFGSYLSDCEITMWQKVLKKLKSIPHDQVQKKLKVSFDGLKEDTEKQAFLDIACFFIGRDRNDVIHILNGCGFYADIGIKVLVERSLVTVDNKNKLQMHDLLRDMGRQIIKEESPYDPENRSRLWHPVEVFDILSNHTGTKAIKGLAMEFPRENTFCLNTKAFEKMNKLRLLQLDGVQFNGDFQYLSKELRWLYWHGFPSTYALMQLQQGSLVSLELKYSKLEHLNDIRKRLENLKILNLSHSLDLTETPKFYWMPNLEKLILNDCPSLTAISESIEFLRELLLLNLTNCTGLRKLPRNIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAITKVPFSIVRLKSIGYISLCGFEGFSREVFPSFIWSWLSPSNNVISLVQTSSSMSSLGTFKYLLKLQSVCVECCSKLQLSQDVAKISEVLKATNCQKLETSATIAHISDMYPSPLIDDCHDQVGTSWSNNYLKSFLIQMGTKLQVTNIVEDNTLQTSDGTCDPFLLPCDNKFVWFTFGCKGSYVIFDVPTLKGGNLKGMILFVVYHSSPDYITSEGCEGVLIINYTKTTIQAYKSDTLTSFEVEDWKNITSNLEPGNKVKVMVVFGEDFIVEKTIVSLLYDEPVDKEMEHCQVVDEENVTVSGHNATNVSVSGGYSTINRFGEGTVNHMQITRHTDGLYADVVGPVLLVPHYPDQPAEAIEEKIRAAEGQPELQAAAESETIGPSLGALILDALKELRADFVKLEELEDVIAQIPRWASYESTHILQFLLMSLLLLLFYFSIMTMVSVTSVHTSFRVLSLYEFLIHW* 1647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0542 1646 Gene3D - 209 361 IPR027417 -
Mal7g0542 1646 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 543 710 - -
Mal7g0542 1646 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 40 526 - -
Mal7g0542 1646 Pfam NB-ARC domain 223 435 IPR002182 GO:0043531
Mal7g0542 1646 Pfam NB-ARC domain 728 873 IPR002182 GO:0043531
Mal7g0542 1646 Pfam TIR domain 535 699 IPR000157 GO:0007165
Mal7g0542 1646 Pfam TIR domain 31 173 IPR000157 GO:0007165
Mal7g0542 1646 SUPERFAMILY Toll/Interleukin receptor TIR domain 25 176 IPR035897 -
Mal7g0542 1646 Gene3D - 366 453 IPR042197 -
Mal7g0542 1646 Gene3D - 797 881 IPR042197 -
Mal7g0542 1646 Coils Coil 1157 1177 - -
Mal7g0542 1646 ProSiteProfiles TIR domain profile. 533 696 IPR000157 GO:0007165
Mal7g0542 1646 MobiDBLite consensus disorder prediction 1 26 - -
Mal7g0542 1646 PRINTS Disease resistance protein signature 238 253 - -
Mal7g0542 1646 PRINTS Disease resistance protein signature 308 322 - -
Mal7g0542 1646 PRINTS Disease resistance protein signature 402 416 - -
Mal7g0542 1646 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 543 710 IPR044974 GO:0006952
Mal7g0542 1646 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 707 1459 IPR044974 GO:0006952
Mal7g0542 1646 ProSiteProfiles TIR domain profile. 29 160 IPR000157 GO:0007165
Mal7g0542 1646 SMART till_3 534 674 IPR000157 GO:0007165
Mal7g0542 1646 SMART till_3 30 174 IPR000157 GO:0007165
Mal7g0542 1646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 225 463 IPR027417 -
Mal7g0542 1646 MobiDBLite consensus disorder prediction 1 15 - -
Mal7g0542 1646 Gene3D - 529 708 IPR035897 -
Mal7g0542 1646 Gene3D - 25 207 IPR035897 -
Mal7g0542 1646 SUPERFAMILY "Winged helix" DNA-binding domain 868 974 IPR036390 -
Mal7g0542 1646 SUPERFAMILY "Winged helix" DNA-binding domain 443 525 IPR036390 -
Mal7g0542 1646 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 526 IPR044974 GO:0006952
Mal7g0542 1646 Gene3D Ribonuclease Inhibitor 988 1338 IPR032675 -
Mal7g0542 1646 SUPERFAMILY Toll/Interleukin receptor TIR domain 527 672 IPR035897 -
Mal7g0542 1646 SUPERFAMILY L domain-like 989 1259 - -
Mal7g0542 1646 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 707 1459 - -
Mal7g0542 1646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 715 892 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0542 Mal-Chr7 14627182 14662727 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0542 83 528 WRKY Transcription Factor Family AT4G12020 28.384 2.73e-36 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0542 - - mtr:MTR_4g020850 1152.5