Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0506 ATGTTCCTCTTCGACCCTCCTAGTGACGAAGAAATTGAACACTTCGATCCCGAATCAGAAGTGGGATCAGAACCAGAACAAGGTAAATTAGAATCGGAATCGGAATCAGAATCTGGAGGAGAAGAAGAAAAAGAAGAAGAGCCCAAAGAGCCGCGAGTTTCAAAGAAGAAAACACGGTCTCCATGGGACTTCACAAAATACTCGGAATCAGTAGCTGAAGAACACGCTCGCAGGAGCACAACCTCTGTAGACGACAAGATTTATGCCGTTAGACAACGCTCCACACCCGTCGTTGCTTTTCCCGACACCGATGATGACAGTAGCTCTGAACCTGATAAACAAGAAGATTATAGACTGGAAGAAGAAGATGAAGAAGAGGGTAATGTTTGTGACAACAAACCCTTTTTTGCTCCTTCTGATGGAACATCTTTTAGTGCTGATTCATTCTTGCAACTCAATTTGTCTCGCTCTTTACTCCTGGCTTGTGAGGCCTTGGGGTATGCTAAACCAACACCAATTCAGGCGGCTTGTATACCATTAGCACTGACTGGTCGTGATATATGTGGAAGTGCCATTACCGGATCAGGAAAGACAGCTGCATTTGCACTACCTACTTTAGAGAGGTTGCTATTCCGTCCAAAACGTGTGCATGCAATAAGGGTTCTTATTCTTACTCCAACCAGAGAGTTGGCAGTCCAAGTTCACAGTATGATAAAGGAGCTTGCTCAATTTACTGATAATATAAGGTGTTGCCTGATTATCGGTGGTCAGCCAATGAAGGGGCAAGAGGCTGCTTTGAGATCAATGCCAGACATTGTTGTGGCTACTCCAGGACGCATGATTGACCATTTGCGCAATTCTATGTCGGTGGATTTGGATGATCTCGCTGTTTTAATCCTTGATGAAGCAGATCGTCTTTTGGAGCTTGGATTTAGTGCTGAAATTCAGGAACTAGTTCGCATGTGTCCCAAAAGAAGGCAGACCATGCTGTTTTCAGCAACCATGACCGAGGAGGTTGATGATCTTATTAAACTTTCCCTGTCAAAACCTGTGCGTCTTTCTGCTGATCCATCTGCAAAACGGCCAGCATCCTTGACTGAGGAGGTGGTTAGAATAAGAAGAAGGCTTGAAGTTAATCAGGAAGGAGTTCTCCTTGCAATGTGCACCAAAACTTTTACTTCTAAAGTGATCATTTTCAGTGGAACAAAGCAAGCGGCACATAGGCTGAGGATTATATTTGGATTATCTGGATTGAAAGCTGCTGAGCTTCATGGAAATCTTACTCAGGCCCAACGTCTTGATGCTTTGGAACAGTTCAGGAAGCAGCAAGTGGATTTTTTGGTTGCGACTGATGTGGCTGCACGTGGCCTTGACATTATTGGTGTTCAAACGGTTATCAATTTTGCATGTCCTCGTGATATTACCAGCTATGTTCATCGAGTGGGCCGTACTGCAAGAGCTGGCAGAGCGGGATCTGCTATCACATTTGTTACTGATAATGACCGGTCACTTCTAAAAGCTATTGCAAAGAGGGCTGGTTCAAAGCTGAAGAACCGCATTGTTGCAGAGCAATCTATACTCAAGTGGTCTCAAGTAATTGTGCAAATGGAGAATCAAATTTCTGAAGTACTTCGAGAAGAGAGAGAAGAAATGATCCTAAGGAAAGCTGAAATGGAGGCCACAAAGGCCGAAAACATGATTGCACATAGGGATGAGATCTTCTCCCGCCCCAAAAGAACCTGGTTTGTTACGGAGAAGGAGAAGAAGCTTTCGGCTAAAGCAGCAAAGGCACCGTTGGCTAAGGAAGAGAGTTCTTATCAAAAGGTGATTAGTGCCCAGGAAGCTGAAGATCTTAAAATGAAGGAAAAGAGGAAGCGGGAGCGAGAGAAAAATTTGCCTAGAAAGAAGCGCAGAAAGTTGGAAGCTGCTAGAGAGATGTTGGAGGATGAGGAGCAGGATGACAAACCAAAAGATAAGGGGACAGATAAGAATGAAAAGGGTGGAATGACACTTGTTGATCTTGCATACCGACGTGCAAAATCAGTAAAGGCTGTCAAGAGGGCACTAGATTCTGGAAAGGTTGTGAAGAAGCCTCAAAAGAAATCTAATAAATCTAATCCTTCGCGAAAGACTACTTCTTCGAGGACAGAAGAGATGCGGGAGCTATTCCAGACTGACATGAAGGATAAAAAGCCGAAACAGAGAGGTTCTGGAGTAGGAATGAAGGCCAAGAAATCATTCAAAAGCAAGTCAAGGGATGGATCCAAAAATCATTGA 2277 0.4405 MFLFDPPSDEEIEHFDPESEVGSEPEQGKLESESESESGGEEEKEEEPKEPRVSKKKTRSPWDFTKYSESVAEEHARRSTTSVDDKIYAVRQRSTPVVAFPDTDDDSSSEPDKQEDYRLEEEDEEEGNVCDNKPFFAPSDGTSFSADSFLQLNLSRSLLLACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRVHAIRVLILTPTRELAVQVHSMIKELAQFTDNIRCCLIIGGQPMKGQEAALRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIQELVRMCPKRRQTMLFSATMTEEVDDLIKLSLSKPVRLSADPSAKRPASLTEEVVRIRRRLEVNQEGVLLAMCTKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLDALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDITSYVHRVGRTARAGRAGSAITFVTDNDRSLLKAIAKRAGSKLKNRIVAEQSILKWSQVIVQMENQISEVLREEREEMILRKAEMEATKAENMIAHRDEIFSRPKRTWFVTEKEKKLSAKAAKAPLAKEESSYQKVISAQEAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDEEQDDKPKDKGTDKNEKGGMTLVDLAYRRAKSVKAVKRALDSGKVVKKPQKKSNKSNPSRKTTSSRTEEMRELFQTDMKDKKPKQRGSGVGMKAKKSFKSKSRDGSKNH* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0506 758 Coils Coil 612 632 - -
Mal7g0506 758 CDD DEADc_DDX27 158 354 - -
Mal7g0506 758 Pfam Helicase conserved C-terminal domain 389 488 IPR001650 -
Mal7g0506 758 MobiDBLite consensus disorder prediction 94 131 - -
Mal7g0506 758 MobiDBLite consensus disorder prediction 634 666 - -
Mal7g0506 758 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 299 307 IPR000629 -
Mal7g0506 758 MobiDBLite consensus disorder prediction 679 697 - -
Mal7g0506 758 Gene3D - 110 355 IPR027417 -
Mal7g0506 758 MobiDBLite consensus disorder prediction 1 82 - -
Mal7g0506 758 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 147 175 IPR014014 GO:0003724
Mal7g0506 758 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 364 527 IPR001650 -
Mal7g0506 758 Gene3D - 363 532 IPR027417 -
Mal7g0506 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 508 IPR027417 -
Mal7g0506 758 MobiDBLite consensus disorder prediction 617 758 - -
Mal7g0506 758 PANTHER RNA HELICASE 304 708 - -
Mal7g0506 758 PANTHER RNA HELICASE 52 279 - -
Mal7g0506 758 SMART helicmild6 403 488 IPR001650 -
Mal7g0506 758 MobiDBLite consensus disorder prediction 18 35 - -
Mal7g0506 758 MobiDBLite consensus disorder prediction 45 82 - -
Mal7g0506 758 MobiDBLite consensus disorder prediction 711 736 - -
Mal7g0506 758 PANTHER BNAA01G17110D PROTEIN 304 708 - -
Mal7g0506 758 PANTHER BNAA01G17110D PROTEIN 52 279 - -
Mal7g0506 758 Coils Coil 541 561 - -
Mal7g0506 758 SMART ultradead3 166 368 IPR014001 -
Mal7g0506 758 CDD SF2_C_DEAD 365 497 - -
Mal7g0506 758 Pfam DEAD/DEAH box helicase 171 342 IPR011545 GO:0003676|GO:0005524
Mal7g0506 758 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 178 353 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0506 Mal-Chr7 13571984 13579717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0506 135 505 Eukaryotic Initiation Factors Gene Family AT3G13920 32.086 4.93e-48 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0506 K13181 - gmx:100791233 1028.08