Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0505 ATGAAGCCTTTTCTCTCTTTGAATCATCCTGATACCGAGTTCAATTGCTCACAAGTTGATCGTAATCACTCAATGGCTCAGGCTCATGCTCATTATCCTTACAGTGATCCAATTTTTGCTGGTTCATTAGTTGCTTACGCCCCGCAAGCTGTTAATCAACCCCAAATGTTGCCTCAGATGATGGGATTAGCATCCACTAGAGTTGCATTACCGCTGGATCTTGCACAAGATGGCCCCATTTATGTCAATGCAAAACAATACCATGGTATACTAAGAAGGCGACAATCACGAGCTAAGCTTGAAGCACAAAACAAACTTATCAAAAATCGTAAACCATATCTTCACGAATCTCGTCACAAACATGCTTTGAATAGAGTTAGAGGATCCGGTGGCCGATTTCTAAGTACCAAACAGCTTTCAGAGTCTAATACAGAATTTGTCACTGGTTCTCATTCTGGCACTGGCAACAAATATCAAAAGGAAGATCCTTCAGAGATTGAAAGTCATCATTCCTCAAAAACAGGAGATAATGTATCTTCCATCACAACCTATTCCGACCGGACATGTTTTTCCGGTAATAGTTTCAGTTTTAGGCAGCCAGAGCACATATTTCTCGGAAACTCTCCAAACATGGGTGGAGGAGCACCACAGTGCAGTGGAGGACTCACATTTGGTGGAACAAAGCAACGTGCTTCAGTTGTGCGGTGA 708 0.4251 MKPFLSLNHPDTEFNCSQVDRNHSMAQAHAHYPYSDPIFAGSLVAYAPQAVNQPQMLPQMMGLASTRVALPLDLAQDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKNRKPYLHESRHKHALNRVRGSGGRFLSTKQLSESNTEFVTGSHSGTGNKYQKEDPSEIESHHSSKTGDNVSSITTYSDRTCFSGNSFSFRQPEHIFLGNSPNMGGGAPQCSGGLTFGGTKQRASVVR* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0505 235 ProSitePatterns NF-YA/HAP2 subunit signature. 81 101 IPR018362 GO:0003677|GO:0016602
Mal7g0505 235 MobiDBLite consensus disorder prediction 137 157 - -
Mal7g0505 235 ProSiteProfiles NF-YA/HAP2 family profile. 76 136 IPR001289 GO:0003700|GO:0006355
Mal7g0505 235 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 1 220 IPR001289 GO:0003700|GO:0006355
Mal7g0505 235 Gene3D - 76 138 - -
Mal7g0505 235 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 79 133 IPR001289 GO:0003700|GO:0006355
Mal7g0505 235 MobiDBLite consensus disorder prediction 137 180 - -
Mal7g0505 235 MobiDBLite consensus disorder prediction 158 172 - -
Mal7g0505 235 PRINTS CCAAT-binding transcription factor subunit B signature 79 101 IPR001289 GO:0003700|GO:0006355
Mal7g0505 235 PRINTS CCAAT-binding transcription factor subunit B signature 110 133 IPR001289 GO:0003700|GO:0006355
Mal7g0505 235 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 1 220 - -
Mal7g0505 235 SMART cbf3 75 136 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0505 Mal-Chr7 13560306 13561624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0505 20 194 CCAAT-HAP2 Transcription Factor Family AT1G17590 47.027 2.91e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mal7g0505 CBFB_NFYA 7.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0505 K08064 - gmx:100793856 348.206