Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0500 ATGGGGGGTCGTTGCTCTAAATTTTCTTTTTGTTGGTTCCACTCTCACCTCAATCCTTCTGTTCTTGAATCCTCTGACCAAGAAAATGGTGGCAAGAGTGAAAAAACCTTGTGGCCTAGTTTTAGTGAGTACAGTTTTGAAGAATTGAAGGCTGCTACAAATGGATTCTCCTCAGAAAACATAGTTTCTGAGCATGGTGAGAAAGCTCCAAATGTTGTTTACAAAGGGAAACTTGAGAATGGACAGTTGATTGCCATCAAACGTTTCAACAAGTTCGCTTGGCCCGATTCTCGACAATTCATTGAAGAATCTAAACAAGTGGGGAGCCTTAGAAGTGAACGTTTGGCAAATTTGATTGGTTGTTGCTATGAAGGGGACGAGAGGCTGCTAGTGGCAGAGTTTATGCCACATGAAACTCTGGCTAAGCATCTCTTTCATTGGGAGTCACAACCCATGAAATGGGCAATGAGGTTGAGAGTGGCCTTCTATTTAGCTCAAGCTCTTGAATATTGTACAAGTAAAGGAAGGGGGTTGTATCATGATCTCAATGCCTATAGGGTCTTGTTTGATCAGGACGGTAATCCAAGGTTATCTTGCTTTGGACTGATGAAGAACAGCAGAGATGGCAAGAGTTACAGTACAAATTTGGCTTTCACCCCTCCTGAATACTTAAGGACAGGTAGAGTGACAGCAGAGAGTGTGGTTTACAGTTTTGGAACTTTGTTGCTTGATCTCTTGAGTGGCAAGCATATTCCACCAAGCCATGCACTTGATCTGATACGTGGAAAAAACTATTTGATGTTGATGGATTCAGCATTAGAGGGTCACTTTTCAAAGGATGATGGAACTGAGTTAGTTCGTTTGGCTTCACGTTGTTTACAATATGAAGCTCGTGAGAGGCCAAATGCTAAGTCTCTTGTTGAAACCCTTATGTCACTTCAGAAAGAAACAGAGCAGGTTCCCTCACATGTTCTGATGGGTCTAAAGCAAGAAACAGAATCCTCAACAAAGCCATTGTCATTGACATCTTTTGGTGAATCATGTTTGAGATTGGATCTTACTGCCATACATGCAATATTAGAGAAGACTGGTTACAAAGATGATGAAGGAATTGCCAATGAGCTTTCTTTTCAATTGTGGACTAGTCAAATGCAAGAGACCTTGAATTTGAAGAAGCATGGAGATGCTGCTTTTCGAGCTAAGGACTTTGTCACTGCCATTGACTGCTACACACAATTCATAGATGGAGGTACCATGGTGTCACCTACAGTGTATGCAAGGCGTTGCTTGTCTTATTTAATGAATGACATGCCACAGGAAGCTCTAGGGGATGCCATGCAAGCTCAAGTGATATCTCCTGAGTGGTCTACTGCCTTGTATCTTCAAGCAACTTGTCTTTTCAGCCTTGGGATGGAAAATGATGCACAAGAGACTCTCAAAGATGGAACTAACATGGAAGCTAAAAAGCATAAAAATTTGAAAACTGTATAG 1491 0.4158 MGGRCSKFSFCWFHSHLNPSVLESSDQENGGKSEKTLWPSFSEYSFEELKAATNGFSSENIVSEHGEKAPNVVYKGKLENGQLIAIKRFNKFAWPDSRQFIEESKQVGSLRSERLANLIGCCYEGDERLLVAEFMPHETLAKHLFHWESQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNYLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVETLMSLQKETEQVPSHVLMGLKQETESSTKPLSLTSFGESCLRLDLTAIHAILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDAAFRAKDFVTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVISPEWSTALYLQATCLFSLGMENDAQETLKDGTNMEAKKHKNLKTV* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0500 496 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Mal7g0500 496 ProSiteProfiles Protein kinase domain profile. 59 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g0500 496 Gene3D Tetratricopeptide repeat domain 384 496 IPR011990 GO:0005515
Mal7g0500 496 SUPERFAMILY TPR-like 388 482 IPR011990 GO:0005515
Mal7g0500 496 SUPERFAMILY Protein kinase-like (PK-like) 33 319 IPR011009 -
Mal7g0500 496 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Mal7g0500 496 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Mal7g0500 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 492 - -
Mal7g0500 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 492 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0500 Mal-Chr7 13232314 13237367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0500 18 310 Glycoside Hydrolase AT3G07070 33.645 2.26e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mal7g0500 PK_Tyr_Ser-Thr 8.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0500 - - gmx:100814477 919.072