Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0413 ATGTTGCTTGATGGTACTAAGTTTGATTCCAGCAGAGATAGAAGAACTCCTTTCAATTTTAGGCTTGAACAAGATTGTATCACCTCACTGATGAAGAAACTGAATCGTTGCTTTCGCTGCATAACCGAGAAAAGTGATGTATACAGCTATGGTATTGTTGTACTAGAAGTACTAACAGAGAAGCAACCAATTGATCCAACAATACCAAATGGACTTTACATTATTGATTGGGTTAGACAGAAAAGAGGTGGAGTTGAAGTGTTAGATGAAAGCTTAAGAGCAAGGCCAGAATCTGAAATTGACGAAATGTTGCAGATTTTAAGTGTTGCTTTGTTATGTGTAACTTCAAGCCCTGATGGTAGACCAACAATAAATGATGTGGTTGCATTGATGTTAATGTGGCTAGGAAACTAG 414 0.3744 MLLDGTKFDSSRDRRTPFNFRLEQDCITSLMKKLNRCFRCITEKSDVYSYGIVVLEVLTEKQPIDPTIPNGLYIIDWVRQKRGGVEVLDESLRARPESEIDEMLQILSVALLCVTSSPDGRPTINDVVALMLMWLGN* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0413 137 Pfam Protein tyrosine and serine/threonine kinase 40 129 IPR001245 GO:0004672|GO:0006468
Mal7g0413 137 Gene3D Transferase(Phosphotransferase) domain 1 14 135 - -
Mal7g0413 137 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 41 131 - -
Mal7g0413 137 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 41 131 - -
Mal7g0413 137 SUPERFAMILY Protein kinase-like (PK-like) 39 133 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0413 Mal-Chr7 10949580 10950296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0413 31 131 Receptor kinase-like Gene Family AT5G56040 45.714 2.98e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal7g0413 PK_Tyr_Ser-Thr 3.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0413 - - gmx:100794698 159.844