Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0352 ATGGCGTCAAGTCCTCGCACCGTTGAAGAGATCTTCAAAGATTTCAGTTCTCGTAGAGATGGTATCGTTCGTGCTTTAACTCAAGATGTTGATGAATTTTATGCACTCTGTGATCCAGATAAGGATAACTTGTGCCTCTATGGACATGCAAATGAATTATGGGAAGTGACTCTTCCAGCAGAGGAAGTTCCACCTGAGCTTCCGGAGCCAGCTCTCGGAATCAATTTTGCTAGGGATGGCATGAACCGTAGGGACTGGCTTTCCCTGGTTGCTGTGCACAGTGATTCATGGTTGCTTTCTGTGGCCTTTTATCTTGGAGCTCGTCTTAACCGCAATGAAAGGAAACGCTTATTTAGCATGATCAATGAGCTTCCAACTGTGTTTGAAGTTGTAACTGACAGGAAGCCGATAAAGGACAAGCCCACTGTAGACAGTGGAAGCAAATCTCGGGGCAGCACCAAGAGATCAAGTGATGGACAAGTTAAAAGCAACCCAAAGTTGGTCGATGATCAAGGTTATGAAGAGGAAGAAGATGAGCATAGTGAAACCCTTTGTGGGAGCTGTGGCGGAAACTACAACGCGGATGAATTTTGGATTGGTTGTGATATTTGTGAGAGGTGGTACCATGGAAAATGTGTGAAGATTACTCCTGCAAAAGCTGAGAGCATAAAGCAATACAAATGTCCATCATGCAGCATCAAGAGGGGCAGGCCCTAA 717 0.4519 MASSPRTVEEIFKDFSSRRDGIVRALTQDVDEFYALCDPDKDNLCLYGHANELWEVTLPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSMINELPTVFEVVTDRKPIKDKPTVDSGSKSRGSTKRSSDGQVKSNPKLVDDQGYEEEEDEHSETLCGSCGGNYNADEFWIGCDICERWYHGKCVKITPAKAESIKQYKCPSCSIKRGRP* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0352 238 CDD PHD_AL_plant 184 234 IPR044104 -
Mal7g0352 238 PANTHER ZINC FINGER, FYVE/PHD-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE, ALFIN-RELATED 2 237 - -
Mal7g0352 238 Pfam Alfin 7 132 IPR021998 GO:0006355|GO:0042393
Mal7g0352 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 232 IPR013083 -
Mal7g0352 238 PANTHER CPG BINDING PROTEIN 2 237 IPR045104 GO:0006355|GO:0042393
Mal7g0352 238 SMART PHD_3 184 232 IPR001965 -
Mal7g0352 238 MobiDBLite consensus disorder prediction 138 174 - -
Mal7g0352 238 ProSitePatterns Zinc finger PHD-type signature. 185 231 IPR019786 -
Mal7g0352 238 ProSiteProfiles Zinc finger PHD-type profile. 182 234 IPR019787 -
Mal7g0352 238 Pfam PHD-finger 185 232 IPR019787 -
Mal7g0352 238 SUPERFAMILY FYVE/PHD zinc finger 173 236 IPR011011 -
Mal7g0352 238 MobiDBLite consensus disorder prediction 146 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0352 Mal-Chr7 7631722 7635596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0352 2 237 Alfin-like Transcription Factor Family AT5G05610 77.215 3.31e-120 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Mal7g0352 Alfin 5.2e-68 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0352 - - gmx:100782478 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0352 7 7631722 7635596 Mal7g0352 7 7631722 7635596 ECH