Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0344 ATGATGATGGGAGAGATGCGCAAGTCTTTCAAGGATTCTCTTAAAGCTCTTGATGCTGATATTCAATTTGCCAATACTCTAGCTTCTGATTATCCAAGTGAAACTGATGGAGCCCGCTTTCAAATGAGATTGTCTTATAGCCCAGCTGCTCAATTTCTCCTTTTTCTGGTTAAGTGGACTGATTGCCATCTCGCCGGAGCCTTAGGATTGCTTAGAGTTCTCATATACAAGACGTATGAGGATGGGAAGACAACCATGTCCGTATATGAAACAAAAGCCAGTCTAAAGGAGTTCTATGGTGTGATCTTTCCCTCCTTATTACAACTTCAGAGAGGAATCACTGATGTAGAAGAGAGGAAACAGAAAGATTTGTGTGCTACAAAATACAAGCCTAAAGATGAGATTAGAAAAGGAAAGCTATCTGAAATTGATTTAGAGAGAGAAAAAGAATGTCCAATTTGTATGGAGATGAACAACAAGGTTGTGTTACCCAATTGCAACCATTCTTTGTGTATGAAATGCTATAATGACTGGCATACGAGATCTCAATCTTGCCCTTTCTGCCGCGACACTCTTAAAAGAGTAAACTCTGGCGACCTTTGGATCTACATGAGCAACAGTGAGATAAGTGATTTGGAATCAATCAACAAGGAGAATTTAAAAAGGCTATTTATGTACATTGAAAAGTTGCCTCTGATTTCGCCAAATCAAATATTCATCGCTTATCCTCAAAACTTTTGA 741 0.3873 MMMGEMRKSFKDSLKALDADIQFANTLASDYPSETDGARFQMRLSYSPAAQFLLFLVKWTDCHLAGALGLLRVLIYKTYEDGKTTMSVYETKASLKEFYGVIFPSLLQLQRGITDVEERKQKDLCATKYKPKDEIRKGKLSEIDLEREKECPICMEMNNKVVLPNCNHSLCMKCYNDWHTRSQSCPFCRDTLKRVNSGDLWIYMSNSEISDLESINKENLKRLFMYIEKLPLISPNQIFIAYPQNF* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0344 246 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 4 238 - -
Mal7g0344 246 SUPERFAMILY RING/U-box 135 194 - -
Mal7g0344 246 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Mal7g0344 246 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Mal7g0344 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 198 IPR013083 -
Mal7g0344 246 PANTHER RING FINGER PROTEIN 41, 151 4 238 - -
Mal7g0344 246 SMART ring_2 151 188 IPR001841 -
Mal7g0344 246 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0344 Mal-Chr7 7406616 7409924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0344 99 193 C3H Transcription Factor Family AT5G01960 31.000 1.77e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0344 K25840 - zju:107430836 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0344 7 7406616 7409924 Mal7g0344 7 7406616 7409924 ECH