Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0330 ATGTTTGGGAGGATTCTAAGTTTAGCATCACTTAATCCTATTGCCTCAGGTTATCATATTAAGGTTAGGGTAATAAGAAGATGGGACATGCATAGCCAGTTTGTGGATGGAAGGGTTCATTCTACTGAGTTGATTGTGTTGGATCGAAGTTTTTTTTATTTAAATTTATTTTTAAAGTTGATTTTCGGTTTTAAAATTCAAGTTACGATACCTTCTTATTGTAGTGGGAAATTTAAGAATTTGATAAGGGAAGGAATGGTGTATAAGATGACTAATTTTCATGTTTTACCAAATGATGGTGACTTCATGCTAACCTACAATGGATACAAGATCATATTTCGTGCTAGGACCCGCGTTGAAAATGAGGAGACTTATCTTATTAGTCCACATGGTTTATCTTTTATGAAAGCTAAAGACATCCTTGAGAATACGAAAGGATGTCGTTATTCTGTTGATGTTATTGGGGTTTTGACTGGAATAGACTTTGATTCTTATTATAAGCGTATGTTGCTCAATGATAAGGAGGTTTCATTTTATTTATCTGATCATAGTGGGAAGTTTCGTTGTGTGTTGCATGGATCTTTGGTTGATCAGTTTAAGGAGGATGTAATGAATACGTCCAATGGGTTGCCTGTAGTGATAATGCAGTTTGCCAAAGTTGAGATTCAAAAAGGATCTTTGGTTGTGACAGATGTTGATGGTGTAACAAGGATTTTTATTAATCCTCCTATTGCAGAATACTTCCTCTTTAAAACTGGGTTGGAGCTACCGTTTGATGGAAACCATCTTCAACTTGATACTCCCATTGTTAGGAAACCATATTTCATTCCTTTGGATTTTCTTAAATCCTATCCTAAGAAAACACTAAATGAATTGGTTCACTGTGCTGAGGATGAATTATTTGTTGTCCAAGCTAAAATTTCCCGTATTTATCAGAAGGATCAGTGGTGGTATCCTACCTGTCCTATTAATATTGGGATGTTGAGTGGTAGAAAAATGGTTTTTGTTGTTAGGAAGAAGCCTATCGTTCGACTTGGATGTGATGATGTGTTTGAGGTGCTCAATATCTATGAGAATGAGTCCCTTAATAAGTATTTTGCTAGAGATGGGAAGAACTACACTCCCACTAAGCGTATATTCAAGCCAGCGTTTGATAATTTTAGTGGTGTTGGAGAACCTGTTGCAAGGGCTAAGTTTAAGAGTGTACCTAACCTTAGTAACTTTGTCTCTTATAAACATAAACATACTTATGCTATGGAGAATGTATGTTACGCTAGTGGATCTAATGTGGATGGTGATGTGTTTCAAGCTTAA 1314 0.3577 MFGRILSLASLNPIASGYHIKVRVIRRWDMHSQFVDGRVHSTELIVLDRSFFYLNLFLKLIFGFKIQVTIPSYCSGKFKNLIREGMVYKMTNFHVLPNDGDFMLTYNGYKIIFRARTRVENEETYLISPHGLSFMKAKDILENTKGCRYSVDVIGVLTGIDFDSYYKRMLLNDKEVSFYLSDHSGKFRCVLHGSLVDQFKEDVMNTSNGLPVVIMQFAKVEIQKGSLVVTDVDGVTRIFINPPIAEYFLFKTGLELPFDGNHLQLDTPIVRKPYFIPLDFLKSYPKKTLNELVHCAEDELFVVQAKISRIYQKDQWWYPTCPINIGMLSGRKMVFVVRKKPIVRLGCDDVFEVLNIYENESLNKYFARDGKNYTPTKRIFKPAFDNFSGVGEPVARAKFKSVPNLSNFVSYKHKHTYAMENVCYASGSNVDGDVFQA* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0330 437 PANTHER REPLICATION FACTOR A 1, RFA1 7 352 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal7g0330 437 SUPERFAMILY Nucleic acid-binding proteins 6 121 IPR012340 -
Mal7g0330 437 CDD RPA1_DBD_A_like 20 119 - -
Mal7g0330 437 SUPERFAMILY Nucleic acid-binding proteins 132 253 IPR012340 -
Mal7g0330 437 CDD RPA1_DBD_B_like 152 252 - -
Mal7g0330 437 Gene3D - 4 123 IPR012340 -
Mal7g0330 437 Gene3D - 127 255 IPR012340 -
Mal7g0330 437 Pfam Domain of unknown function DUF223 63 144 IPR003871 -
Mal7g0330 437 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A 7 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0330 Mal-Chr7 7209954 7212155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0330 4 323 Core DNA Replication Machinery Family AT5G45400 21.818 4.70e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0330 - - mtr:MTR_8g062060 187.578