Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0276 ATGCAAATAATGGAGTGTCACAGAACTATAGGCCAAGTGGTACTGCCTGTGTTCTACGATGTACATCCGTCTGAAGTTCGTCATCAAACCGGTGTGTTTGGTAAAGCTTTTCAAAATCTTTTGAACAAAATTTTGGAAGCAGAAGAATACAAAATGCTAATGTGGGGAGATATAGTAATGCGGAGAGTCGTGCTTAATGCGTTTAAGAAAGAAACAGGGTTAAAGTGGAGAGTAGCGCTTCATTATGCTGCTGGCCTTGCTGGGTTTGTTGTCCTAAATTCTAGGAATGAAAGTGAGATTATCAAGGATATTGTTGAAACTGTTACACGTTTGCTTGACAAGACAGACTTGTTCATTGCTGATAATCCTGTGGGAGTCGAATCTCGAGTGCACGATATGATTCAACTTCTAGACACTCAACAATCAAATGATGTCCTACTACTAGGGATGTGGGGGATGGGTGGAATCGGCAAAACCACCATTGCAAAAGCCATTTACAATAAAATTGGCCGCAATTTTGAAGGTAAGAGCTTTCTTGCAAATATTAGGGAGGTTTCGGAGCAAGTTTCTGGACACGTGTATTTACAAGAACAACTTATGTATGATATTTTCAAAGAAACCACAACCAAGATACAAAACATTGAATCGGGAAAATCTACATTAAAGGAAAGACTCTGTCATAAAAGAGTTCTTCTTGTACTGGACGATGTGAATAATATGGACCAACTAAATGCTTTGTGTGGAAGTTGTAAATGGTTTGCTCCAGGGAGTAGAATAATCATCACTACAAGGGATAAGCATATACTTAGAGGGAATAGAGTTGACAAAATATACATAATGAAAGAAATGGATGAAAGTGAATCTCTGGAGCTTTTTAGTTGGCATGCATTCAAGCAAACAAGCCCCAAAGAAGATTTTTCTGAAATTTCCAGAAATGTAGTTAAGTATTCTGGGGGATTGCCGCTAGTTCTTGAAGTCCTTGGGTCCTATTTGTTTGATAGGGAGGTGTCAGAGTGGATTTGTGTATTGGAGAAACTCAAAAGAATTCCCAATGGTCAAATACATAAGAAGTTAAAGATAAGCTATGATGGTTTAAATGATGATACAGAGAAATCAATATTCCTCGACATAGCTTGTTTCTTTATTGGAATGGACCGAAATGATGTTATTCGTGTATTAAATGGTTGTGGACTTTTCGCAGAAATTGGAATAAGTGTCCTTGTTGAGAGAAGCCTTGTAACGGTTGATGATACAAACAAGCTTGGCATGCATGATTTGCTGCGAGATATGGGAAGAGAATTCATTCGTGAGAAATCACCAACGGAGCCCGAGGAACGTAGTAGGTTGTGGTTTCATGAGGATGTGCTTGATGTATTGTCAGAACACACTGGAACAAAAGCTGTTGAGGGACTGACTTTGAAGCTGCCAGGTCATAGTACACAGCGTTTTAGTACCAAAGCCTTTGAGAACATGAAGAAACTCAGATTGCTGCAACTTTATGGTGCACAACTTGATGGAGATTTTAAATATCTTTCAAGAAATTTGAGATGGTGGTAG 1557 0.3879 MQIMECHRTIGQVVLPVFYDVHPSEVRHQTGVFGKAFQNLLNKILEAEEYKMLMWGDIVMRRVVLNAFKKETGLKWRVALHYAAGLAGFVVLNSRNESEIIKDIVETVTRLLDKTDLFIADNPVGVESRVHDMIQLLDTQQSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGKSFLANIREVSEQVSGHVYLQEQLMYDIFKETTTKIQNIESGKSTLKERLCHKRVLLVLDDVNNMDQLNALCGSCKWFAPGSRIIITTRDKHILRGNRVDKIYIMKEMDESESLELFSWHAFKQTSPKEDFSEISRNVVKYSGGLPLVLEVLGSYLFDREVSEWICVLEKLKRIPNGQIHKKLKISYDGLNDDTEKSIFLDIACFFIGMDRNDVIRVLNGCGLFAEIGISVLVERSLVTVDDTNKLGMHDLLRDMGREFIREKSPTEPEERSRLWFHEDVLDVLSEHTGTKAVEGLTLKLPGHSTQRFSTKAFENMKKLRLLQLYGAQLDGDFKYLSRNLRWW* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0276 518 Gene3D - 120 279 IPR027417 -
Mal7g0276 518 Pfam TIR domain 2 108 IPR000157 GO:0007165
Mal7g0276 518 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 517 IPR044974 GO:0006952
Mal7g0276 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 377 IPR027417 -
Mal7g0276 518 Pfam NB-ARC domain 127 362 IPR002182 GO:0043531
Mal7g0276 518 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 41 IPR035897 -
Mal7g0276 518 CDD AAA 124 240 - -
Mal7g0276 518 SUPERFAMILY "Winged helix" DNA-binding domain 353 459 IPR036390 -
Mal7g0276 518 Gene3D - 282 366 IPR042197 -
Mal7g0276 518 SMART AAA_5 144 284 IPR003593 -
Mal7g0276 518 ProSiteProfiles TIR domain profile. 1 112 IPR000157 GO:0007165
Mal7g0276 518 PRINTS Disease resistance protein signature 147 162 - -
Mal7g0276 518 PRINTS Disease resistance protein signature 224 238 - -
Mal7g0276 518 PRINTS Disease resistance protein signature 317 331 - -
Mal7g0276 518 PRINTS Disease resistance protein signature 489 505 - -
Mal7g0276 518 Gene3D - 1 119 IPR035897 -
Mal7g0276 518 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 6 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0276 Mal-Chr7 6276399 6279361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0276 1 516 WRKY Transcription Factor Family AT4G12020 31.179 7.83e-66 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0276 - - lja:Lj0g3v0331109.1 766.148