Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0263 ATGAAGCAAGTAGTAGGAATGGTTGTTTCAAATAAGATGCAGAAATCGGTTGTGGTAGCAGTTGATAGATTATTCCACCACAAAGTTTTCAACCGATATGTTAAGCGCACGTCCAAGTTTATGGCTCATGATGAAAACAATCTTTGCAACATCGGTGACCGTGTTCGATTGGATTCTTCTAGGCCTCTGAGCAAGAATAAACATTGGGTGGTTGCTGAAATTCTCAAGAAAGCACGCATATATGTTCCTCCCTCTGCAACGGTGTCTGAGAATGCGAGCTCGAACTCTGTAGGACCTACATCTACATCATAA 312 0.4199 MKQVVGMVVSNKMQKSVVVAVDRLFHHKVFNRYVKRTSKFMAHDENNLCNIGDRVRLDSSRPLSKNKHWVVAEILKKARIYVPPSATVSENASSNSVGPTSTS* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0263 103 Hamap 30S ribosomal protein S17 [rpsQ]. 1 76 IPR019984 GO:0003735|GO:0005840|GO:0006412
Mal7g0263 103 Gene3D - 1 98 IPR012340 -
Mal7g0263 103 SUPERFAMILY Nucleic acid-binding proteins 2 84 IPR012340 -
Mal7g0263 103 Pfam Ribosomal protein S17 6 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mal7g0263 103 PRINTS Ribosomal protein S17 family signature 62 69 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mal7g0263 103 PRINTS Ribosomal protein S17 family signature 20 43 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mal7g0263 103 PRINTS Ribosomal protein S17 family signature 52 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mal7g0263 103 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 94 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mal7g0263 103 PANTHER 37S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL 1 94 - -
Mal7g0263 103 TIGRFAM uS17_bact: ribosomal protein uS17 2 71 IPR019984 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0263 6 75 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 36.620 7.67e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0263 K02961 - gmx:100794499 175.637