Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0166 ATGTCTAGAGTGTTGTCAACAAGGATAGTGAACACCTTCAGATGCCTATTATGGATTCAGATCAATGTCATTGGTGGTGATGCAAATTATCGATTTGTCTTCTGGGATAATGATTGTGCTGCTATTGTTGGCAAATCAGCTGTTGAGATGCGTCAAACAATGATAGAGTCTATTGCTAATGATTTTGCTCTTTACAAGTCAACTGTTATCATTTTAACTTATTTGGGAAGGGGAAATAGGTTTAAAATGAAAATTTTATCAAAGAGGGTTCCCGGAAGATGGAAGGAGGATATTAAGGAGGAGGTCATGTCCACAACTTCTGATGCTGAAGAAAAGGAAGAGGAGTTTGACAAAGACCAATGTCTTGCGTGGAAGATGCCTATTACAGAGGCTTTTGCTACTGCTGAAAATGTACAAGTGATGCATTTTCCCAACAAGATTTCAAAGCATATCTTTCCAAAAGATCAAAAGAAAATGCTGTTAGTAGATGTTGATACAAAGAAGAAATACAAGTGTCGTTTAATTACTTCCAACATATATCGTTATGAAAAATATTTGGGAGGAGAATGGTACCAATTTGTCAAAGATTGTAAGCTTGGGGAAGGTGATACTCTGGTCTTTGAGTTTGAGAAAGTTCCTGTAAAGTTATCTGTTATGGTTGTTCGTCCTAATCATCAATGTTGGGTATTTTGA 693 0.3651 MSRVLSTRIVNTFRCLLWIQINVIGGDANYRFVFWDNDCAAIVGKSAVEMRQTMIESIANDFALYKSTVIILTYLGRGNRFKMKILSKRVPGRWKEDIKEEVMSTTSDAEEKEEEFDKDQCLAWKMPITEAFATAENVQVMHFPNKISKHIFPKDQKKMLLVDVDTKKKYKCRLITSNIYRYEKYLGGEWYQFVKDCKLGEGDTLVFEFEKVPVKLSVMVVRPNHQCWVF* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0166 230 Coils Coil 95 115 - -
Mal7g0166 230 Pfam B3 DNA binding domain 141 222 IPR003340 GO:0003677
Mal7g0166 230 ProSiteProfiles B3 DNA-binding domain profile. 126 224 IPR003340 GO:0003677
Mal7g0166 230 SUPERFAMILY DNA-binding pseudobarrel domain 128 224 IPR015300 -
Mal7g0166 230 CDD B3_DNA 141 222 IPR003340 GO:0003677
Mal7g0166 230 Gene3D - 105 225 IPR015300 -
Mal7g0166 230 SMART B3_2 129 224 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0166 Mal-Chr7 3986447 3987551 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal7g0166 B3 1.5e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0166 - K17108 mtr:MTR_5g071410 88.1965