Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0147 ATGAGTAAGGGTGATATTGTTAAGCCGCCGATCACTCGGCATCCTGTTTCCTGCATCATAGGTGATGCATGCACCGGCAAAACCATGATTCTAGGTTGTATTCGAGGTAACCCTAATTTTCCCAATAATCCCTCAACACGTTTTCCTCCTGCTAGGTTGTATTCTTCTGATGCTCAAAGAAGAATGCTTGTTGTTGATAAACCAGCATTCAATGGTTTAGCTTTATGTGATCTCGCTATTTTCGTTATTGACATTATGCGTGATGATGGCTGCTTACTACCACAAGACTCGCTCAATCTATTAAAACTCACCAACAAACAATTCATTGTTGTCTTGAATAAGATTGACATGATTCATGACTGGAAAACATGTCCCAATTCTCCTATTCGTAAAGCATTGTTGCAACAGTCTAAGGTTGTTCAAGATGAGTTTCATACCAGGGTTTCTAAGGTTGTTTCTCAGTTCAAGACACACGGCCTAAATACTCAATTGTGTTATGAAAACAACAAAACAACAATCCAAGGACAACAAACATTCAGCATTGTGCCCACTAGTGCAATAACTGGTGAAGGAATCCCAGACATGTTATTTCTATTGTTCAAGTGGACCCAAAAGACCATGATTCACAAATTTACCTATAGTGAATATGTCCAGAAACTTAAACATGATATTATGCGACCTAGATTATCATCTGTGGTGAAGCCTAATCATCATTCAGACTATGTTCAAAAAGAGGCCTCGCGAAACGTCGACTCAATCTTGAGCATGATTGACATCAGTGTTGAGGGCGTTTATGTCAAGGCATCTGCCCTTTGCTGCTTGAAAGAATTACTGGATATTTTGATAGCTACAGAAATCAAGGTTCCTGTTAGTGCTATAAACATTGGTCCTGTACTTAAGAAGGATGTCAAGAAGGCCAGTGCAATGCTTCCAAATAAACGAGAGTATGCTGCTATATTGGCATATCGTGTCAAAGTCACCCCTGAAGCTACGGAACTTGCAGATAAATTGGGTGTCAAAATTTTAACCTCCAATAAAGCTTATCATCTGTTTAATCTATTTATAAATTACATGGACAACATGAATTACCAGAAAATGAAAGAATCTGCTGACGAGACATGCGCTCTGAAGATCATGCCAAATTTCGTCTTCAACAATAAGGATCCAATTGTTTTGGGAGTTGATATCCTTCAAGGCATTTTAATGATTGGAAATCCAATTTGTATTCCTTCACAAAAGAACATTGATATTGGCTGCATTGCCTCCATCGAGCATAACCTTAAACCGGTTTATATAGCGAAGAAAGGGCAGCAAGTAGTCATTAAGATTGTTGGCAGCAATTCTGAGGAACGCCAGAAAATGTTTGGGAGGCATTTTGGGATTGATGATGTTCTTGAAAGCCATATTATCGGGGTGATCTGA 1422 0.3896 MSKGDIVKPPITRHPVSCIIGDACTGKTMILGCIRGNPNFPNNPSTRFPPARLYSSDAQRRMLVVDKPAFNGLALCDLAIFVIDIMRDDGCLLPQDSLNLLKLTNKQFIVVLNKIDMIHDWKTCPNSPIRKALLQQSKVVQDEFHTRVSKVVSQFKTHGLNTQLCYENNKTTIQGQQTFSIVPTSAITGEGIPDMLFLLFKWTQKTMIHKFTYSEYVQKLKHDIMRPRLSSVVKPNHHSDYVQKEASRNVDSILSMIDISVEGVYVKASALCCLKELLDILIATEIKVPVSAINIGPVLKKDVKKASAMLPNKREYAAILAYRVKVTPEATELADKLGVKILTSNKAYHLFNLFINYMDNMNYQKMKESADETCALKIMPNFVFNNKDPIVLGVDILQGILMIGNPICIPSQKNIDIGCIASIEHNLKPVYIAKKGQQVVIKIVGSNSEERQKMFGRHFGIDDVLESHIIGVI* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0147 473 Gene3D - 256 362 IPR036925 -
Mal7g0147 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 205 IPR027417 -
Mal7g0147 473 Pfam Translation-initiation factor 2 243 352 IPR023115 -
Mal7g0147 473 Pfam Elongation factor Tu GTP binding domain 71 202 IPR000795 GO:0003924|GO:0005525
Mal7g0147 473 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 231 469 - -
Mal7g0147 473 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 247 368 IPR036925 -
Mal7g0147 473 Gene3D - 67 214 IPR027417 -
Mal7g0147 473 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 231 469 IPR015760 -
Mal7g0147 473 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 13 219 IPR015760 -
Mal7g0147 473 Gene3D Translation factors 367 471 - -
Mal7g0147 473 SUPERFAMILY Translation proteins 373 469 IPR009000 -
Mal7g0147 473 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 13 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0147 Mal-Chr7 3463828 3466352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0147 217 469 Eukaryotic Initiation Factors Gene Family AT1G76810 57.031 8.68e-78 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0147 K03243 - osa:4339796 282.722