Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0066 ATGGGTGAAGTGGTGAAATCTATTGTTCCTGAGTCTGTGTTGAAGAAGCAGAAGAGAGAAGAGGAATGGGCTTTAGCTAAAACTCAAGAATTTGAAGCTGCTAAGAAGAAGAGAGCTGAGAACCGTAAGCTGATCTACAGCAGGGCAAAGCAGTATTCTCAGGAGTATGAGGATAAGGAAAGGGAATTGATTAGTTTGAAGCGTGAGGCTAAGCTGAAAGGTGGATTTTATGTTGATCCTGAGGCGAAGCTCTTGTTTATTATTCGCATTCGAGGTATTAATGCCATGGACCCCAAGACAAGAAAGATCCTGCAACTATTTCGATTGAGACAGATTTTCAACGGTGTTTTCCTTAAAGTTAACAAAGCAACAATGAACATGTTGCACAGGGTTGAGCCTTACGTTACTTATGGATACCCAAATTTGAAGAGTGTAAGGGAACTCATTTACAAACGTGGGTATGGAAAGCTAGACAGGCAGCGGACTCCTCTCACTGACAACTCAATTATTGAGCAGGGACTGGGAAAGCATGGTATCCTATGCATCGAAGATCTTATCCACGAGATCTTGACTGTTGGACCACATTTCAAGGAAGCAAACAACTTCCTTTGGCCATTCAAGCTCAAGGCTCCATTGGGTGGTTTAAAGAAGAAGAGGAACCACTATGTTGAAGGCGGTGATGCTGGAAACCGTGAGAATTACATCAATGAGCTCATCAGGAGAATGAATTAA 732 0.4249 MGEVVKSIVPESVLKKQKREEEWALAKTQEFEAAKKKRAENRKLIYSRAKQYSQEYEDKERELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKTRKILQLFRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDRQRTPLTDNSIIEQGLGKHGILCIEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0066 243 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 3 243 - -
Mal7g0066 243 Coils Coil 49 69 - -
Mal7g0066 243 Pfam Ribosomal L30 N-terminal domain 9 80 IPR012988 -
Mal7g0066 243 ProSitePatterns Ribosomal protein L30 signature. 103 135 IPR018038 -
Mal7g0066 243 Pfam Ribosomal protein L30p/L7e 85 135 IPR016082 -
Mal7g0066 243 SUPERFAMILY Ribosomal protein L30p/L7e 84 243 IPR036919 -
Mal7g0066 243 TIGRFAM uL30_euk: 60S ribosomal protein uL30 10 243 IPR005998 GO:0000463|GO:0003735|GO:0022625
Mal7g0066 243 PANTHER 60S RIBOSOMAL PROTEIN L7 3 243 IPR039699 -
Mal7g0066 243 Gene3D - 189 243 IPR036919 -
Mal7g0066 243 Gene3D - 84 188 IPR036919 -
Mal7g0066 243 CDD Ribosomal_L7_archeal_euk 84 243 IPR035808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0066 Mal-Chr7 1564380 1567160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0066 6 243 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 86.134 1.40e-157 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0066 K02937 - gmx:100813342 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0066 7 1564380 1567160 Mal7g0066 7 1564380 1567160 ECH