Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0039 ATGAAGCCGATTCAACTTCCACCTCCAACCGCCACCGGCTCAGCCACAAACTCCGGTTCACCAAACAACAACAACAACCGCCCTCAACGCCGCCGTAAAGACCTAACCCTACCTCTTCCACAGCGTGACACAAATCTAGCTGTACCGCTTCCTCTTCCACCTTCCGGTGGTAGCGGTGGAAGTGGTGGAGGAGGAAACGGAAGCGGTGGTGGAGGAGGAAGTGGTGGAGCGAGTCAACAGCTAGTGATTCCGTTTTCTGAACTTGAAAGATTGAACCGGATCGGAAGCGGAAGCGGAGGAACGGTTTACAAAGTAGTTCACAGAATCAACGGTCGTGCTTACGCGTTGAAGGTGATATACGGTCATCACGAGGAATCTGTTCGTCGTCAGATCCATCGCGAAATCCAGATCTTGCGTGATGTTGATGATGTAAACGTGGTGAAGTGTCATGAGATGTACGATCACAACGCTGAGATTCAGGTTTTGCTTGAATACATGGACGGTGGATCTCTCGAAGGGAAACATATTCCGCAGGAAAATCAGCTCGCTGACGTGGCTCGTCAGATCCTCCGTGGACTGGCGTATCTCCACCGTCGTCACATCGTTCACCGTGATATCAAACCGTCGAATCTGTTGATAAATTCACGGAAACAGGTGAAGATCGCTGATTTTGGTGTAGGAAGGATTCTGAATCAAACGATGGATCCGTGTAATTCATCTGTAGGAACGATTGCGTACATGTCGCCGGAGAGGATAAACACGGATATCAACGACGGACAATACGATGCTTACGCCGGTGATATATGGAGTTTAGGTGTGAGTATATTGGAGTTTTACATGGGAAGGTTTCCATTTGCGGTTGGTAGACAAGGTGATTGGGCGAGTTTGATGTGTGCAATTTGTATGTCACAACCACCAGAAGCTCCGACGACTGCTTCGCCGGAGTTTAGGGATTTCGTTTCGAGGTGCTTGCAGAGAGATCCGTCGAGGAGATGGACCGCTTCGAGGTTGCTTTCACATCCTTTTCTGTTGAGAACTAGTTCAAATCATAATCAGAGTCCTCCAAATATGCATCAGTTACTTCCTCCACCACCAAGATGA 1101 0.4886 MKPIQLPPPTATGSATNSGSPNNNNNRPQRRRKDLTLPLPQRDTNLAVPLPLPPSGGSGGSGGGGNGSGGGGGSGGASQQLVIPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLLRTSSNHNQSPPNMHQLLPPPPR* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0039 366 Gene3D Phosphorylase Kinase; domain 1 76 167 - -
Mal7g0039 366 Pfam Protein kinase domain 89 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g0039 366 MobiDBLite consensus disorder prediction 9 26 - -
Mal7g0039 366 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Mal7g0039 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 27 352 - -
Mal7g0039 366 CDD PKc_MAPKK_plant_like 86 343 - -
Mal7g0039 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Mal7g0039 366 ProSiteProfiles Protein kinase domain profile. 88 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g0039 366 MobiDBLite consensus disorder prediction 345 366 - -
Mal7g0039 366 SUPERFAMILY Protein kinase-like (PK-like) 85 359 IPR011009 -
Mal7g0039 366 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 27 352 - -
Mal7g0039 366 Gene3D Transferase(Phosphotransferase) domain 1 169 359 - -
Mal7g0039 366 MobiDBLite consensus disorder prediction 1 79 - -
Mal7g0039 366 SMART serkin_6 88 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0039 Mal-Chr7 750141 751241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0039 1 359 MAP Kinase Kinase Gene Family AT1G51660 69.529 3.53e-171 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mal7g0039 Pkinase 3.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0039 K13413 - gmx:100818488 593.964