Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4656 ATGGAGGAAAGAACTGAGATAGATAATATTAAGGTTGATGATGTGATGCCTGGTTTTCGTTTTCATCCAACAGATGAAGAGCTTGTTGGTTTTTACCTCAAGAGAAAAATTCAGCAAAAATCTCTTCCTATTGAACTCATTAAGCAAGTGGATATTTATAAGTATGATCCATGGGACCTTCCAAAAGAGCTGGCTAGTAGTGGTGAGAAAGAATGGTATTTCTATTGTCCAAGGGACAGAAAATATAGAAATAGTTCAAGGCCAAATAGAGTTACAAGAGCTGGATTTTGGAAGGCTACTGGAACAGATAGGCCTATATACTCATCAGATGGAAAATGCATTGGTTTGAAAAAATCACTTGTGTTCTATAAAGGTAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAATTTAGACTACCTTGTCTTTCAGATTCAACCTCTCCTCCCAAAAAGTTCTCAGATAAAAGTTTCTCTCCAAATGATTCATGGGCAATATGTAGGATCTTCAAGAAAGCAAACTCCCTTTCCATGGTACAAAAAGCTTTATCTCACCCTTGGATCTCCCAATTACCAGGAAGCATGGTTACTGAATTACTCACACAAACTACAAACATCAATCAATTCTGTTCAGAAAATAATATATCATGTACAACAACAGAACAAGGATCATCAGCAGGAACAAACTTACAAATCAACAAGCATGATCTACAACAAGTCTCCAACACCAATAACTTCCCAGCTTCAGATTTTCCAACATACAAACCAATCAACAACATCAACACAATTTCCAAGTCTTCACAAATTTCTATTCCTAATGGAGACATTATTGACAACCTAATGTTCTACACACTTGAAACCAATGGTACCACAAAGTGCACAATTGATGATAGTTCAATTCTTTCCAACACTAACTATATTGGTTTTGAAGATGCAAATAATCAATATAATGGCTTCTCAATTAGTTTACCTCAAGATATGCAACCAAACATTCTCACAGAAACAGAACAATTAGAACAAGGTTGGAGGAAGGTTAATCAAGATCAAATGCAGCTTAATCAATGGGAAAATCTTGGAAGAACAATTGAATTTCCCTTCAATTTGTCTCCAAGTTTTGATGCTTTGAGGACTAATGTTACATGGGACTCACCACCTTGTACTAGTGAAATGTCCACAACCTATGTCACTAGTAAATGTTACACTTAG 1212 0.3606 MEERTEIDNIKVDDVMPGFRFHPTDEELVGFYLKRKIQQKSLPIELIKQVDIYKYDPWDLPKELASSGEKEWYFYCPRDRKYRNSSRPNRVTRAGFWKATGTDRPIYSSDGKCIGLKKSLVFYKGRAAKGMKTDWMMHEFRLPCLSDSTSPPKKFSDKSFSPNDSWAICRIFKKANSLSMVQKALSHPWISQLPGSMVTELLTQTTNINQFCSENNISCTTTEQGSSAGTNLQINKHDLQQVSNTNNFPASDFPTYKPINNINTISKSSQISIPNGDIIDNLMFYTLETNGTTKCTIDDSSILSNTNYIGFEDANNQYNGFSISLPQDMQPNILTETEQLEQGWRKVNQDQMQLNQWENLGRTIEFPFNLSPSFDALRTNVTWDSPPCTSEMSTTYVTSKCYT* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4656 403 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
Mal6g4656 403 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Mal6g4656 403 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Mal6g4656 403 PANTHER NAC DOMAIN-CONTAINING PROTEIN 94-RELATED 1 401 - -
Mal6g4656 403 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 401 - -
Mal6g4656 403 SUPERFAMILY NAC domain 14 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4656 Mal-Chr6 130929940 130932993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4656 1 289 NAC Transcription Factor Family AT1G26870 56.610 5.77e-98 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal6g4656 NAM 2.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4656 - - mtr:MTR_6g011860 741.88