Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4651 ATGAAAAAAAGCAAGGCTTGTGCCGCATGCACATATCAAAGAAGAAAGTGTACTAGTGAATGTGTGTTAGCTCCTTATTTTCCGGCCGATAAACCAAAATTATTTGGCAAAGCTCATCGTTTGTTTGGTGTTTCCAACATACAAAAGATACTAAACAAAATCAAGGACGGTGATAAAAGAGATGATGCAATGAAATCAATTATTTTTGAGTCGGATATTCGTGCAAAATTCCCAAAGAATGGATGTCTTGGTGTTATTAAGCAATATGAAAGTTTGTTAAAGGAGGCTTTTGAAGAGTTAAATCAAACAAATAGGCTACTAGCTTATTGTAAACTAAACAACCTACAACAACAAAATCTTCATTACTCCCTACCTTCCACTAGTTCTCAAATTCCAATGTTCAACAATTATGGTGATGTTCCTAATTATTATCACAATAGTGAAAATAATAATATGATGATAGCATCTTCTTCTTATGTAAGTGACATCATCCCTCATGATGTTAATAATACTCTAATTGACACAAATTTGAATACAAAGTCAACGGGTACAACAAAGGTTGCACAATTGAGTGGTGTCAGCAATGGTGGTGATGACGATGCCATAGAAGACAATTATAATTTGATGGCAACAAAAGAGTTATCTGATAATGAAGAGTTTGATGGCGATCAAATTGGAAATTTGGATTTTGATTTGATTGATATTGATATGTTGCTCAACAATGATGAACCTGTGGGAATGGAATCAAATGATTTATTTGAATTCATTAGGTAG 774 0.3333 MKKSKACAACTYQRRKCTSECVLAPYFPADKPKLFGKAHRLFGVSNIQKILNKIKDGDKRDDAMKSIIFESDIRAKFPKNGCLGVIKQYESLLKEAFEELNQTNRLLAYCKLNNLQQQNLHYSLPSTSSQIPMFNNYGDVPNYYHNSENNNMMIASSSYVSDIIPHDVNNTLIDTNLNTKSTGTTKVAQLSGVSNGGDDDAIEDNYNLMATKELSDNEEFDGDQIGNLDFDLIDIDMLLNNDEPVGMESNDLFEFIR* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4651 257 Coils Coil 86 106 - -
Mal6g4651 257 ProSiteProfiles LOB domain profile. 5 107 IPR004883 -
Mal6g4651 257 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Mal6g4651 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 174 - -
Mal6g4651 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4651 Mal-Chr6 130892192 130892965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4651 4 107 AS2 family AT3G47870 54.808 7.88e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal6g4651 LOB 2.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4651 - - mtr:MTR_6g011200 267.7