Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4647 ATGAGGAAGAGACAAGTAGTTGTGAGAAGATCAGAAGATCCACAAAGAAGTGTTGTGAAATATGGAGAATGTCAAAAGAATCATGCGGCTAATGTTGGAGGTTATGCTGTTGATGGTTGTAGAGAATTTATGCCAAGTAGTGAACAAGGTACAAATGGTGCTCTCACTTGTGCTGCTTGTGGATGTCATAGAAACTTTCACAAAAGAGAAGTTGAAGTTGTTTGTGAGAGTTCATCACCTAACTCAAATGGTACTTAA 258 0.3837 MRKRQVVVRRSEDPQRSVVKYGECQKNHAANVGGYAVDGCREFMPSSEQGTNGALTCAACGCHRNFHKREVEVVCESSSPNSNGT* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4647 85 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 20 71 IPR006456 -
Mal6g4647 85 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 21 70 IPR006456 -
Mal6g4647 85 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 81 - -
Mal6g4647 85 PANTHER MINI ZINC FINGER PROTEIN 3 15 81 - -
Mal6g4647 85 Pfam ZF-HD protein dimerisation region 19 71 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4647 Mal-Chr6 130820641 130820898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4647 1 84 Zinc finger-homeobox gene family AT3G28917 61.616 6.00e-34 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mal6g4647 ZF-HD_dimer 3.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4647 - - aprc:113868039 146.747