Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4628 ATGATGGATGCAATGGAGAAAAATTCAAGAGATGTAGAGAGTGATGAAAAATTTGATTTGCCACCTGGATTTAGGTTTCATCCAACAGATGAAGAACTCATAACTCATTACCTCTCACAAAAAGTTCTTGACAATTCTTTCTGTGCTATAGCCATTGGTGAAGCTGATTTGAACAAGTGTGAACCTTGGGATTTACCTTGGAGGGCCAATATGGGTGAGAAGGAGTGGTATTTTTTCTGTGTGAGGGACAGAAAATATCCAACTGGTCTAAGGACAAATAGGGCCACATGTGCTGGATATTGGAAGGCAACAGGAAAAGACAAAGAGATATATAGAGAAAAGATACTAATTGGAATGAAGAAAACACTTGTTTTCTACAAAGGAAGAGCTCCTAAAGGTGAAAAAACAAATTGGGTCATGCATGAATATCGATTAGAAGACACATATTCTTTACAAAATATATCCAAAAGAGCTATGAAGGAGTGGTCTATATGCAGAGTTTTTGAGAAAGATTCTTGTGGAAAGAAAATGCATATTCAAGATTTGGTAACATTCAATTCAATTGGAAAAGAACTACTACCTCCATTGATGGACTCTTCACCATACAATAGTGAAACAAAAACAACTACAATTGGAGATTCATCACATGTGACATGTTTCAATGATCCAAATCTAATTGATGATAATCAAAGAACACAAGACAATGACAACAACATAGTTGATAGCTTTGAAACTCCTATGTTAGCATCTTCATATTCTTCAAACCCTTCTTATGATAATATTTCCCCTGCCTCATGGACCCCTACTTTGTCACACCAATCAACACAAGTTGGAAATTCACAATCCTCAGATTTTTTTATGGTTCAAGAACAATCCATGTTGAAGATGTTGATTGAAAATAATGGAACAAGTAAAAGAACAAAAAATCAGAAAGCTCAAGAATATGACTTTGATGTTGACATTTCATCTATGATGTACAACAATGAAATGTTTCAAAGATCTTATGTGAGTGAAGAATATTCATCAGCTTCAATAGGACATTTTGACACTAGTTACCTATGGAATTTCTGA 1071 0.3464 MMDAMEKNSRDVESDEKFDLPPGFRFHPTDEELITHYLSQKVLDNSFCAIAIGEADLNKCEPWDLPWRANMGEKEWYFFCVRDRKYPTGLRTNRATCAGYWKATGKDKEIYREKILIGMKKTLVFYKGRAPKGEKTNWVMHEYRLEDTYSLQNISKRAMKEWSICRVFEKDSCGKKMHIQDLVTFNSIGKELLPPLMDSSPYNSETKTTTIGDSSHVTCFNDPNLIDDNQRTQDNDNNIVDSFETPMLASSYSSNPSYDNISPASWTPTLSHQSTQVGNSQSSDFFMVQEQSMLKMLIENNGTSKRTKNQKAQEYDFDVDISSMMYNNEMFQRSYVSEEYSSASIGHFDTSYLWNF* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4628 356 SUPERFAMILY NAC domain 16 170 IPR036093 GO:0003677|GO:0006355
Mal6g4628 356 Gene3D NAC domain 29 174 IPR036093 GO:0003677|GO:0006355
Mal6g4628 356 PANTHER NAC DOMAIN-CONTAINING PROTEIN 92-LIKE 13 320 - -
Mal6g4628 356 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Mal6g4628 356 ProSiteProfiles NAC domain profile. 20 170 IPR003441 GO:0003677|GO:0006355
Mal6g4628 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4628 Mal-Chr6 130271708 130273692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4628 19 356 NAC Transcription Factor Family AT5G07680 51.170 7.80e-112 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal6g4628 NAM 3.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4628 - - gmx:100781383 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4628 6 130271708 130273692 Mal6g4628 6 130271708 130273692 ECH