Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4618 ATGCCACCTTTTGTATTCATAGTGTCACAAAATGGAACAGGAAACTACAGAACAGTACAAGAAGCCATTGATGCTGTACCACTTGGAAATACTCGCCGGACGATTATAAGGATATCGCCGGGAATCTACCGGCAACCACTATATGTTGCAAAGACTAAAAATTTCATCACTTTTGTTGGTTTGTGTCCTGAGGATACTGTTCTGACATGGAACAACACTGCCAGTAAAATTGATCACCAACAAGGTTCTAAGGTGATAGGGAATGGGACTTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAAGACTTTATTGCTGAGAATATTACTTTTGAGAATTTTTCTCCTGAGGGTTCAGGGCAAGCAGTGGCAGTTAGAGTATCAGCAGATCGATGTGCATTCTATAATTGCAGGTTCCTTGGATGGCAGGACACACTGTATTTACATTCTGGCAAACAATATTTGAGAGATTGTTACATTGAAGGAAGTGTGGACTTCATTTTTGGTAATAGCACTGCACTCTTGGAACATTGTCATATCCACTGCAAGTCTGCAGGGTTCATAACTGCACAGAGCAGAAAATCTCCACATGAAAAAACTGGTTATGTTTTTTTGAGATGTGCTATCACTGGCAATGGAGGGACTTCATATGCATATCTTGGAAGGCCATGGGGACCTTTTGGAAGAGTGGTCTTTGCATTTACTTACATGGATCATTGCATAAAGCCTGCTGGTTGGAATAATTGGGGAAAAGTTGAGAATGAAAAAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCGGGTTTTTGTCCCTCAAAACGGGTGAAATGGGCTAGAGTATTGAAGGATAAAGAAGCTGAGCAGTTTCTCATGCATAGCTTCATTGATACAGAACCACAAAAACCTTGGCTTGCTCAAAGAATGGCATTAAGGATTCCATATTCTGCTTAG 951 0.409 MPPFVFIVSQNGTGNYRTVQEAIDAVPLGNTRRTIIRISPGIYRQPLYVAKTKNFITFVGLCPEDTVLTWNNTASKIDHQQGSKVIGNGTFGCGSTIVEGEDFIAENITFENFSPEGSGQAVAVRVSADRCAFYNCRFLGWQDTLYLHSGKQYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSPHEKTGYVFLRCAITGNGGTSYAYLGRPWGPFGRVVFAFTYMDHCIKPAGWNNWGKVENEKSACFYEYRCFGPGFCPSKRVKWARVLKDKEAEQFLMHSFIDTEPQKPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4618 316 Gene3D - 5 311 IPR012334 -
Mal6g4618 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Mal6g4618 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Mal6g4618 316 PANTHER PECTINESTERASE 1 315 - -
Mal6g4618 316 Pfam Pectinesterase 7 297 IPR000070 GO:0030599|GO:0042545
Mal6g4618 316 SUPERFAMILY Pectin lyase-like 2 300 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4618 Mal-Chr6 130021505 130024018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4618 5 309 Carbohydrate Esterase AT5G47500 38.339 4.90e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4618 K01051 - gmx:100810259 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4618 6 130021505 130024018 Mal6g4618 6 130021505 130024018 ECH