Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4605 ATGGGTTGCATTGGCTCCAAACATGCTTTAGCCGGTGGTTCTTCTCCGGCACCGACCGTCGGAGATATTGTGGATGTTGTTCCTCCTCCTTCTTCAAAGGTTCATTCTAGTGTGTTGATTTTGGATTCCAAATCATCATCAGATGATAATAAAAATAGCAAGATCAATAAAAATAGCTCAAAAAAAAGTAGTGGCTCATTCAGCTTCAGAATTGGGTTTACACAAAGACATGTTGAAGCTGAACAAAATGCAGCTGGTTGGCCTCCTTGGCTTACAGCTTCTGCAGCTGAAGCTGTTCAAGGTTGGATCCCTCTTAAGGCTGATGCTTTTCAAAAGTTAGATAAGATTGGACAAGGTACATATAGCAGTGTGTTTCGAGCACGCGAAGTTGAAACTGGAAGAATGTTTGCTCTAAAAAAAGTGAGGTTTGACACTTACCAAGCTGAGAGCATAAGGTTCATGGCAAGAGAAATAACAATTCTCAGGAGGCTTGACCATCCAAACATAATGAAATTGGAAGGAATAATCACTTCTCGACTATCAAATAGCATATACCTTGTGTTTGAATACATGGAACATGATCTTGCTGGCCTTGTATCTCGTTCTGACGTTGTTTTCACCGACGCACAGATAAAGTGCTACATGAGGCAACTATTAAGTGGACTTGAGCATTGTCATGTACGTGGTATCATGCATAGAGACATCAAAGTATCAAATATCTTGTTGAACAATGAAGGTGTTCTTAAGATAGGAGATTTTGGATTGGCAAACTCAATTAGTCCTAACAATAAGATTCCTTTAACAAGTCGTGTAGTAACTCTATGGTATCGTCCTCCTGAGCTCTTGATGGGAGCAACGAATTATGGAGTATCAGTTGATCTTTGGAGTGTTGGATGTGTATTTGCAGAACTTTTTCTTGGGAAGCCTATTCTTAAGGGGAGAACTGAGGTTGAACAATTACACAAAATTTTTAAACTGTGTGGTTCTCCACCTGAGGAATTCTGGAAAAAGAGCAAGCTTCCTCATGCAACAATGTTCAAACCTCAGACTAATTACGAAAGCTCTCTTCGAGAGAGATGCGCAGATTTTCCTGAATCGGCCGTAGGTTTACTCGAGACTTTCCTATCTATTGATCCTACCAAGCGTGGAACCGCCTCCTCGGCCCTAATATCCGAGTATTTCAACACCATGCCATATGCTTGTAATCCATCAAACCTGCCAAAGTATACACCTAGCAAAGAAATGGATGCTAAAGGTCATGAAGATACATCCAGGTAA 1278 0.4077 MGCIGSKHALAGGSSPAPTVGDIVDVVPPPSSKVHSSVLILDSKSSSDDNKNSKINKNSSKKSSGSFSFRIGFTQRHVEAEQNAAGWPPWLTASAAEAVQGWIPLKADAFQKLDKIGQGTYSSVFRAREVETGRMFALKKVRFDTYQAESIRFMAREITILRRLDHPNIMKLEGIITSRLSNSIYLVFEYMEHDLAGLVSRSDVVFTDAQIKCYMRQLLSGLEHCHVRGIMHRDIKVSNILLNNEGVLKIGDFGLANSISPNNKIPLTSRVVTLWYRPPELLMGATNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPEEFWKKSKLPHATMFKPQTNYESSLRERCADFPESAVGLLETFLSIDPTKRGTASSALISEYFNTMPYACNPSNLPKYTPSKEMDAKGHEDTSR* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4605 425 Gene3D Phosphorylase Kinase; domain 1 97 192 - -
Mal6g4605 425 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Mal6g4605 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Mal6g4605 425 MobiDBLite consensus disorder prediction 1 27 - -
Mal6g4605 425 PANTHER CELL DIVISION PROTEIN KINASE 1 425 - -
Mal6g4605 425 PANTHER CYCLIN-DEPENDENT KINASE 1 425 - -
Mal6g4605 425 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4605 425 SMART serkin_6 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4605 425 Gene3D Transferase(Phosphotransferase) domain 1 193 425 - -
Mal6g4605 425 MobiDBLite consensus disorder prediction 43 65 - -
Mal6g4605 425 SUPERFAMILY Protein kinase-like (PK-like) 105 400 IPR011009 -
Mal6g4605 425 Pfam Protein kinase domain 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4605 425 CDD STKc_CDK9_like 110 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4605 Mal-Chr6 129896810 129900081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4605 102 425 Core Cell Cycle Gene Families AT5G10270 48.378 3.87e-109 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal6g4605 Pkinase 5.6e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4605 6 129896810 129900081 Mal6g4605 6 129896810 129900081 ECH
Mal3g0240 3 8304882 8310256 Mal6g4605 6 129896810 129900081 ECH