Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4586 ATGTCAGAGAAAGCAAATATTAAAGATGACGGCGAAAGGAAAAGCTATAAGAAAAGAGATGAAACATGTAGTGAGAGTAATGATGCTACTACAGGTCAAGAGAAAGTTGTTTTGAGACACCAAGATGTTGAGGACAAGAAAGATGCACAAGGATTGCTGAATAATGTCATCGAGGAAACAGCAAGTAAACTTGTTGAAGCGAGGAAAAGCAAGGTTAAAGCATTGGTTGGTGCATTTGAAACTGTTATTTCTCTTCAAGAGAAAAAACCTTCTTCTGCAAACACTGTTAGTTGA 294 0.3707 MSEKANIKDDGERKSYKKRDETCSESNDATTGQEKVVLRHQDVEDKKDAQGLLNNVIEETASKLVEARKSKVKALVGAFETVISLQEKKPSSANTVS* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4586 97 PANTHER EMB|CAB62594.1 2 93 - -
Mal6g4586 97 MobiDBLite consensus disorder prediction 1 25 - -
Mal6g4586 97 MobiDBLite consensus disorder prediction 1 36 - -
Mal6g4586 97 Pfam Plant calmodulin-binding domain 4 84 IPR012417 GO:0005516
Mal6g4586 97 SMART CaM_binding_2 2 84 IPR012417 GO:0005516
Mal6g4586 97 PANTHER EMB|CAB62594.1 2 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4586 Mal-Chr6 129609832 129610125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4586 34 82 Calmodulin-binding Proteins AT5G04020 46.000 1.60e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4586 - - mtr:MTR_6g013485 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4586 6 129609832 129610125 Mal6g4586 6 129609832 129610125 ECH
Mal3g0262 3 9071902 9073431 Mal6g4586 6 129609832 129610125 ECH
Mal6g4586 6 129609832 129610125 Mal3g0262 3 9071902 9073431 PCT