Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4543 ATGACTCCTCCAACAACTTCCGATGCCGTTGCGGTGGCGGAGGCACTCTCCGACCACCGCGGAATTAGTATGGCGAATACCGTTCATTCTGAAGTCGCTTCGTGCTTGCCGTTACCTTCGCTTCCGGTTTTCTGCGGTGCTTCCGATCATGACCTACGTCTCTTCGATTCAACGTTGCCGTTGAACCGCGTCAATATTCTCTCGCAGTCAAGGAAAATCGCTGAGATGCTCCGGAACACTGATGTTTCGTACTTGAATTTAAGAGACAATGCCAAAGCTGTTCAGTATAACTACATCGAGCCTTTAGAACTCCACGATGAAGTTCTCAGGTGCAATCCTGAAGCATTTGAATGCAGTCATGCAGGTCCTGTCAAGGAGAAGATCTCCGGTAGTGCATTACCTGAAAAGAAGCTCTCTGAATCAAGTTCTTCTGTCCCAAGTCAGACTCAAAAAGACTATAATGCAACTCCTAGCCGACAGCCTGATAATTTTTCTACAAATGACATTTCTGCACTTTCTTCTAAGAAATCAAAATTTAAGAAGAAAGGTGGCAATGGAATATCTATTGAACCTGACCCTGCTGAGCTTCAAGATGCCAGCATCAGAAGGTTTCAGGAGTTTTTGGAGGATTTATGTAGCAAGGCTGAATTGAATAGTGATGACCGAGATGAAGCAGTAGAATGGTTGCCATTGCCTCTTTCAGATCTTAGATTGCTTGTTAATGAAATAATGTCTATACGTGAGAAGAAACTTCTGCATTTGGTCCCTGTAGAATTCCTTGTTAGACTGCTAAAGGTTTTAGATCATCAGATACATATAGCAGAAGGCCTGTCAATTGAGGATTGTGACAATTCCAATTCAGAAGTAGTTTCATCTCTTTTAGTTGCGTTGGAATCCATTCATGCTGCACTGGCGGTGATGGCTCACACTGACATGCCAAAACAACTTTATAAAGAAGAGGTCATTGAGAGAATTCTGGAGTTTTCCAGGCATCAGATAATGGATGTGATGTGTGCGTGTGATCCATCATACCGCGCGTTATACAGACCAAGTGAAAACACTGCACTTGAAGTTGACGATGAGGAAAATGATGCTGAATTTGGTTCAGCAAGCAAAAAACGACGTACTAGCAGCAAGACCGTGAAGTTGAAGAAATCAGCATCAAGCAGGTTCTCTAGTGCTGTGAATGTTATTCTTCAGAAGTTGTGTACTGTTCTTGGACTACTCAAGGATTTGTTGTTAATAGAGAGGTTGTCAGATAGTTGTATTTTACAACTTGTAAAAACAAGCATTACAATGTTCATGGTTGATAATATCCAGCTCTTGCAATTGAAGGCAATTGGTTTACTCAGTGCGATATTCTATTCATACGCTCAACATCGCACTTATGTGTTAGATGAAATGCTTCACCTTCTTTGGAAATTACCGCATTCAAAGCGAGCTTTAAGGAATTATCACATACGCGAGGAAGAGCAAAGACAGATCCAGATGATTACTGCTTTGCTGATCCAATTAATTCATTGTAGTGCTAACCTTCCTGATACTTTAAGACAAGCATCAAGTGGTAACTCTGTATTGGAAGTCTCGTTTGATGCTAGTTATCCAGCTAAATGCCGCGACGCAGTAACAGAAGTCTGCTGTCTATTTTGGAGAAGTGTACTTGAGCGACTTGCAAGTGTAAAGACTCAGGATGCTTCTGAATTAAAATCCATAATGGAGAATCTTGTTACGGATTTACTGAACACTCTAAATTTACCCGAATATCCTGCTTCAGCTTCTATTCTAGAGGTTCTATGTGCCATACTAATTAAGAATGCTGGGACAAATTCCAAGGATTTTGCTGCACGTTCCATGGCAATTGATATTCTTGGCATTATTGCTGCAAGGTTGAAGCGTGATGCTGTGATTTGTAGCCAGGAAAAGTTCTGGGTACTTCAGGATTTACTTAGTGAGGATGCTGATCCTCAGCATTATCCAAAAGATACATGCTGTGTCTGTTTGGGAGGAAGGGTTGATAATTTGTTAATATGTTCTGGCTGCAATAGGCTTTTTCATGCTGATTGCTTGGATATTAATGAAAATGAAGTCCCCAACCGTAACTGGTACTGTCTTATGTGCATCTGCTCAAAGCAACTGCATGTATTACAATCATATTGCAATTCCCAGCGCAAGGATGATGTAAAAAAGAACCGTAAAGTGTCAAAGGATGATTCTGCATTTTCTAACCATGAAATTGTTCAACAATTGCTTTTGAATTACTTTCAAGATGTCAACTCTGCTGATGACCTGCATCTTTTCATTTCCTGGTTTTATCTCTGCTCATGGTATAAAAATGATCCAAAATGTCAGCAGAAGCCCATTTACTACTTTGCTAGGATGAAATCGAGAACCATAATAAGGGATTCTGGTTCTGTTTCTTCTATGCTGACGCGAGATTCAATCAAGAAGATTACTCTAGCTTTAGGCCAAAACAGTTCATTTTGTCGAGGGTTTGATAAGATTTTTCACACGCTTTTGGTAAGTTTGAAGGAAAACTCTCCAGTTATTAGGGCTAAAGCTTTACGAGCAGTTAGTATCATTGTAGAGGCTGATCCAGAGGTATTGGGTGATAAATTCGTACAATCATCCGTTGAAGGTAGGTTCTGTGACACTGCAATATCTGTTAGAGAAGCAGCATTGGAACTCGTTGGTAGGCATATTGCTTCACATCCAGATGTGGGTTTTAAGTATTTTGAGAAGATTACAGAGAGAATCAAAGATACTGGAGTGAGTGTTCGAAAACGAGCTATAAAAATTATCCGAGATATGTGCTGCTCAGATGCCAACTTCTCGGGGTTTACAAGAGCCTGCACAGAGATAATTTCACGTGTTACTGATGATGAATCGAGTATCCAGGATCTTGTTTGCAAAACATTTTATGAGTTCTGGTTTGAGGAGCCTTCTACTCCACAAACTCAGGTCTTTGGAGATGGTAGTACTGTTCCACTTGAGGTAGCTAAGAAAACAGAGCAAATTGTTGAAATGTTGAAGAGATTGCCCAATAATCAGCTTCTTGTAACTGTAATAAAGCGTTGCTTGACACTTGATTTTTTACCGCAATCTGCAAAAGCAATTGGGGTCAACCCAGTGTCCCTTGTAACAGTGCGTAAGCGTTGTGAGTTGATGTGCAAATGCTTGCTGGAGAAGATATTGCAGGTTGACGAAATGAACAGTAATGAATTGGAAAAGCATGCACTTCCGTATGTGCTAGTCTTGCATGCATTTTGTCTTGTGGACCCAACTCTCTGTGCACCAGCTTCTAACCCTTCCCAGTTTGTCATTACTTTGCAGCCATATCTGAAGACTCAGGTTGACAATAGCATGGTCACACAGCTACTTGAGAGTATTATATTTATAATTGATTCTGTGTTGCCATTGCTGCGTAAGTTACCTCCGAGTATTGTGGATGAACTTGAGCACGATTTGAAGCAGATGATTACCAGGCATTCTTTCTTGAAAGTTGTCCATGCTTGTATCAAGTGCCTCTGCAGTATGAGTGAGCTGGCCGGAAAGGGGGCTGCTGTAGTTGAGCATCTTATTCAGGTCTTCTTCAAATGGTTGGATACCGAGGCAGTTGTAAACAAGCAGCAAGTCGGGCGATCTCTCTTCTGTATTGGTTTGCTTATTCGTTATGGCAACTGTTTGTTAGCAAACTCTGGTAATAAACTTGTTGATGTCAAAAGGAGTCTCAGCTTGTTTATGAAGTATCTTGCTGTGGAGGATTATGCTCTCAAGGTTAGATCATTGCAGGCACTAGGTTATGTTCTAATTGCTAGGCCTGAATATATGTTAGAAAATGACATTGGAAAGATACTGGAGGGAACATTGTCTTCTTTTGCTGATGATCGGCTTAAGATTCAAGCATTGCAAAACATGTTTGAGTATCTTCTTGATGCTGAAAGCAAAATGGAATCAGACGAAGTTGATGATAATGTACCTGGTCACTCGGTCAGAGCTGGGAAGAGTGTGCCTGTTGCAGCTGGTGCTGGGGATACAAACATATGCGGGGGTATAATTCAGTTGTACTGGGATAATATTTTGGGCAGGTGTGTGGATTTCAATGAACAAGTTCGACAATCAGCCTTGAAGATTGTTGAAGTTGTGCTGCGCCAAGGTCTTGTTCATCCCATCACGTGTGTTCCATATCTTATAGCACTTGAAACAGATCCTCTAGAGTCAAATTCAAAGTTGGCTCATCATCTCCTAATGAATATGCATGAGAAGTACCCTGCATTTTTTGAAAGCCGCTTGGGTGATGGACTTCAAATGTCTTTTATGTTCATGCAATCTATTTTTGTTAGTCCTGATGAAAATGTTAACCATAAGACCCAATCTAAGATCCCTGTTTCTGGAAAAGGGAAACCTGAGGCTGACTCGCTCACTCAATCAAGAGTTGGGGTTTCTCGAATATACAAGCTCATCCGAGGGAATCGGATATCAAGGAACAAATTTATGACCTCAATTGTGCGAAAATTTGATAATCCAAAATGGAACAAATTTGTAATAGCTTTCTTAACGTACTGCACAGAGGTCCTTGCCTTGCTTCCATTTGTTGCACCTGATGAACCACTTTATTTAATCTATACTATCAATCGAGTAGTTCAGGTTAGGGCTGGTCCACTGGAGGCGAATTTCAAAGCTTGGAGTTCAAGCTTATTACAAACTGAGGGTCAGGGTACACCTCATGGGAATGGAATGTATCAACAGGCGACAGATGAACCTATTCATACAACCCAAGTTCAGTCAATGGACTTAAATGGTACATTTCAGCAAAATGTAGATGTTCAGCCCTACCTTGATGATATGACATCAGTAGATTTAAATGGACCAAATCACCAATTGCCAGATTATCCTTTATCACATAATGGTAGATTGAAAGTAAAGCCACATGCTGCAGGTTTTGCAGATTCCTTTACCTTCTCAGAAGATGATCTGGAGAAAGTTCAGGCTGACTGTTTATCTGCGATTGCGTTGCAACTTCTTTTAAAGCTAAAGAGACACCTAAAAATCATGTATAGTCTCGACGATGCTAGATGTCAGGCTTATTCTCCCAGTGAACCACCAAAGCCTGGAGATGTTTTCTCAAGACAGAATATTCCATTTAATATTGGTGAATCTCAGTTCAGTTTGCCTACAAGTCCTCAAGAATTAATACAAAGATATCAGGAGTTTAAGAATGCATTGAAGGAAGATACAGTGGATTATTCACTCTACACAGCAAATATAAAACGGAAGAGACAAACACAAACGCCCAGAAAAGTTCGGAAATCAGGACCACCGATGGTAGGTGGTGATAATGATGAGGACGACGATGAGGATTGGGCTGGTGGATCGCGCAACATAAGTTTTAGTGGTGGCCGCAGGTCAAGCCTTAGAAGCTCAAGACAATAG 5430 0.4092 MTPPTTSDAVAVAEALSDHRGISMANTVHSEVASCLPLPSLPVFCGASDHDLRLFDSTLPLNRVNILSQSRKIAEMLRNTDVSYLNLRDNAKAVQYNYIEPLELHDEVLRCNPEAFECSHAGPVKEKISGSALPEKKLSESSSSVPSQTQKDYNATPSRQPDNFSTNDISALSSKKSKFKKKGGNGISIEPDPAELQDASIRRFQEFLEDLCSKAELNSDDRDEAVEWLPLPLSDLRLLVNEIMSIREKKLLHLVPVEFLVRLLKVLDHQIHIAEGLSIEDCDNSNSEVVSSLLVALESIHAALAVMAHTDMPKQLYKEEVIERILEFSRHQIMDVMCACDPSYRALYRPSENTALEVDDEENDAEFGSASKKRRTSSKTVKLKKSASSRFSSAVNVILQKLCTVLGLLKDLLLIERLSDSCILQLVKTSITMFMVDNIQLLQLKAIGLLSAIFYSYAQHRTYVLDEMLHLLWKLPHSKRALRNYHIREEEQRQIQMITALLIQLIHCSANLPDTLRQASSGNSVLEVSFDASYPAKCRDAVTEVCCLFWRSVLERLASVKTQDASELKSIMENLVTDLLNTLNLPEYPASASILEVLCAILIKNAGTNSKDFAARSMAIDILGIIAARLKRDAVICSQEKFWVLQDLLSEDADPQHYPKDTCCVCLGGRVDNLLICSGCNRLFHADCLDINENEVPNRNWYCLMCICSKQLHVLQSYCNSQRKDDVKKNRKVSKDDSAFSNHEIVQQLLLNYFQDVNSADDLHLFISWFYLCSWYKNDPKCQQKPIYYFARMKSRTIIRDSGSVSSMLTRDSIKKITLALGQNSSFCRGFDKIFHTLLVSLKENSPVIRAKALRAVSIIVEADPEVLGDKFVQSSVEGRFCDTAISVREAALELVGRHIASHPDVGFKYFEKITERIKDTGVSVRKRAIKIIRDMCCSDANFSGFTRACTEIISRVTDDESSIQDLVCKTFYEFWFEEPSTPQTQVFGDGSTVPLEVAKKTEQIVEMLKRLPNNQLLVTVIKRCLTLDFLPQSAKAIGVNPVSLVTVRKRCELMCKCLLEKILQVDEMNSNELEKHALPYVLVLHAFCLVDPTLCAPASNPSQFVITLQPYLKTQVDNSMVTQLLESIIFIIDSVLPLLRKLPPSIVDELEHDLKQMITRHSFLKVVHACIKCLCSMSELAGKGAAVVEHLIQVFFKWLDTEAVVNKQQVGRSLFCIGLLIRYGNCLLANSGNKLVDVKRSLSLFMKYLAVEDYALKVRSLQALGYVLIARPEYMLENDIGKILEGTLSSFADDRLKIQALQNMFEYLLDAESKMESDEVDDNVPGHSVRAGKSVPVAAGAGDTNICGGIIQLYWDNILGRCVDFNEQVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPLESNSKLAHHLLMNMHEKYPAFFESRLGDGLQMSFMFMQSIFVSPDENVNHKTQSKIPVSGKGKPEADSLTQSRVGVSRIYKLIRGNRISRNKFMTSIVRKFDNPKWNKFVIAFLTYCTEVLALLPFVAPDEPLYLIYTINRVVQVRAGPLEANFKAWSSSLLQTEGQGTPHGNGMYQQATDEPIHTTQVQSMDLNGTFQQNVDVQPYLDDMTSVDLNGPNHQLPDYPLSHNGRLKVKPHAAGFADSFTFSEDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLDDARCQAYSPSEPPKPGDVFSRQNIPFNIGESQFSLPTSPQELIQRYQEFKNALKEDTVDYSLYTANIKRKRQTQTPRKVRKSGPPMVGGDNDEDDDEDWAGGSRNISFSGGRRSSLRSSRQ* 1810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4543 1809 CDD PHD_SF 662 706 - -
Mal6g4543 1809 Pfam HEAT repeat associated with sister chromatid cohesion 855 896 IPR026003 -
Mal6g4543 1809 ProSiteProfiles Zinc finger PHD-type profile. 660 709 IPR019787 -
Mal6g4543 1809 SUPERFAMILY FYVE/PHD zinc finger 653 715 IPR011011 -
Mal6g4543 1809 MobiDBLite consensus disorder prediction 1757 1809 - -
Mal6g4543 1809 MobiDBLite consensus disorder prediction 1795 1809 - -
Mal6g4543 1809 Pfam PHD-finger 663 708 IPR019787 -
Mal6g4543 1809 ProSitePatterns Zinc finger PHD-type signature. 663 706 IPR019786 -
Mal6g4543 1809 SMART PHD_3 662 707 IPR001965 -
Mal6g4543 1809 PANTHER NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED 20 1807 IPR033031 GO:0003682|GO:0010468|GO:0061780
Mal6g4543 1809 SUPERFAMILY ARM repeat 746 1428 IPR016024 -
Mal6g4543 1809 PANTHER EXPRESSED PROTEIN-RELATED 20 1807 - -
Mal6g4543 1809 MobiDBLite consensus disorder prediction 129 169 - -
Mal6g4543 1809 MobiDBLite consensus disorder prediction 135 169 - -
Mal6g4543 1809 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 650 746 IPR013083 -
Mal6g4543 1809 Gene3D - 828 977 IPR011989 -
Mal6g4543 1809 Pfam Sister chromatid cohesion C-terminus 1348 1546 IPR024986 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal6g4543 Nipped-B_C 1e-53 CL0020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4543 K06672 - gmx:100792021 2749.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4543 6 128880502 128896414 Mal6g4543 6 128880502 128896414 ECH