Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4542 ATGAGCACAAACACACAACATAGTTACAAACTCTCTGTGAAAAAAGCCACAAGAAGAACAAGAAGAAGACACATGGAAGAAAAATGCAAGTCTAAGAAGAAGCTATCACAGAAGCTACAAGCTCTTAAGAATTTAATTCCTTCTCACAATGGAGATGAAGTGAAAACTGATCAATTGTTTAAGGAAACTGCTGATTACATTGTTTTTCTAAGGACAAGGGTGTTGATTCTTCAGAAGCTGGTTGAGATTTATGGAAACAACACTGAGAATGAACATGATGATGTATTGTTATAG 294 0.3503 MSTNTQHSYKLSVKKATRRTRRRHMEEKCKSKKKLSQKLQALKNLIPSHNGDEVKTDQLFKETADYIVFLRTRVLILQKLVEIYGNNTENEHDDVLL* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4542 97 PANTHER TRANSCRIPTION FACTOR UPBEAT-LIKE PROTEIN 12 93 - -
Mal6g4542 97 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 84 IPR036638 GO:0046983
Mal6g4542 97 Coils Coil 25 45 - -
Mal6g4542 97 MobiDBLite consensus disorder prediction 1 33 - -
Mal6g4542 97 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 12 93 IPR044660 GO:0006355
Mal6g4542 97 MobiDBLite consensus disorder prediction 12 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4542 6 83 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 30.769 3.50e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4542 - - mtr:MTR_6g015150 160.614