Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4538 ATGTTTTCATCTTCAATTACTATCAAATGGAGTTCCTTTACTCAATTCATCTTCTTAATCTTCTTCTTAACCTCTCAAAACGACGCCGTTTCATCAATTTCCGACAAATCAACTCTCCTCCGTCTCAAAACCTCCCTCTTCGACCCCACCTCCTTACTCTCCACCTGGGCCCCTACTGCCAACCACTGTTCCTTCTATGGCGTTCTATGTGATTCAAACTCCCGTGTTGTTGCTGTCAATATCACCGGCAACGGCAGCGCCGAAGATGGTAAACTGATTTCACATCCTTGCTCTGATTTTGATAAGTTTCCGCTTTATGGGTTTGGAATTAGGAGAAGTTGTGTTGGTTTTAAGGGTTCTTTGTTTGGGAAGTTTCCATCTTTGATTAGTCAGTTAACTGAGCTTAGGGTTTTGAGTTTGCCCTTTAATGGGTTGGAGGGTTTCATTCCTAAAGAGATTTGGAATATGGAGAAACTTGAGGTTCTTGATTTAGAAGGTAATTTGATTAGTGGGTTTATTCCTTTTGATTTTCATGGTTTGAGGAATTTGAGGGTTTTGAATTTAGGGTTTAATAAGATTGTTGGAATGGTGCCTAGTGTTTTAGGTGATATTGATAGTTTGGAGGTTTTGAATTTAGCTTCTAATGGTTTGAATGGTTCTGTTCCTGGTTTTGTTGGGAGGCTTAGAGGGGTTTATTTGTCTTTTAATCAGTTTAGCGGTGTTATTCCGGTGGAGATCGGTGATTATTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAATTTGTTGGTTCAAGAGATTCCGAAGAGTTTGGGGAATTGTGTTGGGTTGAAGACACTTTTGTTGTATTCGAATTTGTTGGAAGAGGATATTCCTGTTGAATTTGGGAAGCTTACGAGTCTTGAGGTGTTGGATGTTTCGAGGAATACGCTTAGTGGTCATATTCCTCGCGAGCTTGGGAATTGTACGGAGCTTTCTGTTGTTGTGCTGTCCAACCTTTTCAATCCGGTTGGGGATGTTGAGTTTGGTTCTTTGAACGATGAGTTGAATTATTTTGAAGGTTCGATGCCTGAAGAAGTTGTGTCCCTTCCTAAGCTTAGGATTTTGTGGGCTCCCATGGTGAATTTGGAGGGAGGTTTTCCTACGAGTTGGGGTGCTTGTGCTAACTTGGAGATGGTTAATTTGGCTCAGAATTTCTTCACTGGAGAATTCCCGAACCAGCTCGGTTTATGTAAGAAGCTGCATTTTCTTGATCTGAGCTCAAACAATCTTACTGGGGAGCTTTCTGAGGACCTTCATGTTCCATGTATGACTGTGTTTGATGTTAGTGTGAATATGTTGTCTGGTTCAGTTCCTGATTTCTCCAATAATGTTTGTGCTCCCTTTCCTGCCTGGAATGGGAATTTGTTCGAAACTGACGACGTAGCATCTCCTTATGCATCATATTTTTCATTGAAAGTTAGTGAGATAACTCTTTTCGCATCATTAGGGGGAGTTGGTCTTTCAGTTTTTCATAACTTTGGGCAAAACAACTTCACTGGCATTCAGTCATTGCCAATAGCACGAGACAGGATAGAGGAAAAGAGTGGTTACACGCTTCTTGTTGGAGAGAACAAGCTCACAGGACCATTTCCTACATATTTGTTTGAGAAATGCGAGGGATTAGATGCATTGCTGTTGAATGTGAGTTATAATAGCCTATCTGGCAATATTCCTTCTAATATGAGTAAAATGTGCAGATCACTGAATTTTTTGGATGCATCTGGAAATCAAATTTCAGGACCGATTCCAGTTGCTTTAGGGGATTTGGTCTCTCTAGTTTCCCTGAACTTCAGTAGAAACCTATTACTAGGTCAGATTCCCACCAGCCTCGGACAGATGAAGGATCTGAAGTTTCTATCTTTGGCTGGTAATAACTTGAGTGGCTCAATTCCTTCCAATCTGGGTCAGTTGTACTCTTTACAAGTCTTGGACCTTTCAATAAACTCTCTTACCGGTGAGATTCCTAAGTTTATTGAGAACATGAGAAATCTGACCGCTGTTTTGCTGAATAACAACAACCTTTCTGGACACATTCCAGCTGGTTTAGCAAATGTCACTACACTTTCTGTTTTCAACGTGTCTTTCAATAACCTATCTGGATACTTGCCCTCAAATAGTAGCTTGATCAAATGCAGCAGTGCTGTTGGGAATCCGTTTCTAAGTTCCTGCCGCGGTGTTTCTCTGACTGTGCCATCGGCAAATCAACAAGGGCAATTTGACGACAATATTACTGAACCAGATACTGAAAAAAATAGCGATAATGGTTTCAGCGCTATTGAGATAGCATCTATAGCTTCTGCTTCGGCCATTGTCTCTGTTCTTATAGCCCTCATTGTTCTGTTCTTCTTCACGCGAAGATGGAAGCCGAATTCCAGGGTTGGCGGTTCTACCAGAAGAGAAGTTACAGTGTTTACTGATATCGGTGTCCCTTTGACGTTTGAAAATGTTGTCCAAGCCACAGGAAATTTCAATGCAAGCAACTGTATTGGGAGTGGAGGATTCGGAGCAACTTATAAGGCAGAGATATCACAAGGAATCTTGGTGGCGGTGAAACGTCTTTCAGTTGGACGCTTTCAAGGTGTTCAACAATTCCATGCAGAGATCAAGACCCTTGGAAGACTTCATCATCCAAATCTCGTCACTTTGATTGGTTACCATGCTTGTGAGACAGAGATGTTTCTCATATACAATTATCTTCCTGGTGGTAATCTCGAAAAGTTCATCCAAGAGAGATCCACAAGAGCGGTGGATTGGAAAGTTCTTCACAAGATTGCATTGGACATAGCGCGTGCACTTTCCTATCTGCATGATCAATGCGTACCCCGTGTTCTTCATCGCGATGTCAAGCCTAGCAATATCTTGTTGGATGATGATTTCAATGCTTATCTATCTGATTTTGGGCTGGCCAGACTTCTAGGAACTTCGGAGACACATGCTACAACCGGTGTGGCAGGAACATTTGGTTATGTTGCTCCCGAATACGCCATGACGTGCCGTGTTTCTGATAAGGCTGATGTGTATAGTTATGGTGTGGTGCTTCTTGAGTTGCTCTCAGATAAGAAGGCATTGGACCCTTCATTTTCTTCTTACGGAAATGGTTTCAATATAGTAGCATGGGGATGCATGCTGCTGAGGGAAGGAAGGGCAAAGGAGTTCTTCGCCGCAGGGTTATGGGATGTAGGACCAGAAAATGATTTGGTAGAGGTTCTTCACTTGGCAGTTGTTTGTACTGTTGACTCACTATCAACAAGACCTACAATGAAACAGGTTGTGAAAAGACTAAAGCAACTTCAACCTCCATCATGCTAG 3351 0.4205 MFSSSITIKWSSFTQFIFLIFFLTSQNDAVSSISDKSTLLRLKTSLFDPTSLLSTWAPTANHCSFYGVLCDSNSRVVAVNITGNGSAEDGKLISHPCSDFDKFPLYGFGIRRSCVGFKGSLFGKFPSLISQLTELRVLSLPFNGLEGFIPKEIWNMEKLEVLDLEGNLISGFIPFDFHGLRNLRVLNLGFNKIVGMVPSVLGDIDSLEVLNLASNGLNGSVPGFVGRLRGVYLSFNQFSGVIPVEIGDYCGKLEHLDLSGNLLVQEIPKSLGNCVGLKTLLLYSNLLEEDIPVEFGKLTSLEVLDVSRNTLSGHIPRELGNCTELSVVVLSNLFNPVGDVEFGSLNDELNYFEGSMPEEVVSLPKLRILWAPMVNLEGGFPTSWGACANLEMVNLAQNFFTGEFPNQLGLCKKLHFLDLSSNNLTGELSEDLHVPCMTVFDVSVNMLSGSVPDFSNNVCAPFPAWNGNLFETDDVASPYASYFSLKVSEITLFASLGGVGLSVFHNFGQNNFTGIQSLPIARDRIEEKSGYTLLVGENKLTGPFPTYLFEKCEGLDALLLNVSYNSLSGNIPSNMSKMCRSLNFLDASGNQISGPIPVALGDLVSLVSLNFSRNLLLGQIPTSLGQMKDLKFLSLAGNNLSGSIPSNLGQLYSLQVLDLSINSLTGEIPKFIENMRNLTAVLLNNNNLSGHIPAGLANVTTLSVFNVSFNNLSGYLPSNSSLIKCSSAVGNPFLSSCRGVSLTVPSANQQGQFDDNITEPDTEKNSDNGFSAIEIASIASASAIVSVLIALIVLFFFTRRWKPNSRVGGSTRREVTVFTDIGVPLTFENVVQATGNFNASNCIGSGGFGATYKAEISQGILVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGGNLEKFIQERSTRAVDWKVLHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLREGRAKEFFAAGLWDVGPENDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSC* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4538 1116 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Mal6g4538 1116 Gene3D Ribonuclease Inhibitor 227 345 IPR032675 -
Mal6g4538 1116 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 14 1115 - -
Mal6g4538 1116 Gene3D Ribonuclease Inhibitor 511 743 IPR032675 -
Mal6g4538 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 1115 - -
Mal6g4538 1116 SMART LRR_typ_2 250 274 IPR003591 -
Mal6g4538 1116 SMART LRR_typ_2 675 698 IPR003591 -
Mal6g4538 1116 SMART LRR_typ_2 651 674 IPR003591 -
Mal6g4538 1116 SMART LRR_typ_2 603 627 IPR003591 -
Mal6g4538 1116 SMART LRR_typ_2 180 203 IPR003591 -
Mal6g4538 1116 SMART LRR_typ_2 156 179 IPR003591 -
Mal6g4538 1116 SMART LRR_typ_2 298 322 IPR003591 -
Mal6g4538 1116 CDD STKc_IRAK 843 1111 - -
Mal6g4538 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 957 969 IPR008271 GO:0004672|GO:0006468
Mal6g4538 1116 Pfam Leucine Rich Repeat 252 274 IPR001611 GO:0005515
Mal6g4538 1116 Pfam Leucine Rich Repeat 158 180 IPR001611 GO:0005515
Mal6g4538 1116 SMART LRR_sd22_2 132 153 - -
Mal6g4538 1116 SMART LRR_sd22_2 156 177 - -
Mal6g4538 1116 SMART LRR_sd22_2 180 206 - -
Mal6g4538 1116 SMART LRR_sd22_2 627 650 - -
Mal6g4538 1116 SMART LRR_sd22_2 250 269 - -
Mal6g4538 1116 SMART LRR_sd22_2 411 434 - -
Mal6g4538 1116 Pfam Protein kinase domain 840 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4538 1116 ProSitePatterns Protein kinases ATP-binding region signature. 843 865 IPR017441 GO:0005524
Mal6g4538 1116 Gene3D Ribonuclease Inhibitor 32 226 IPR032675 -
Mal6g4538 1116 Gene3D Phosphorylase Kinase; domain 1 801 912 - -
Mal6g4538 1116 SUPERFAMILY Protein kinase-like (PK-like) 818 1108 IPR011009 -
Mal6g4538 1116 Gene3D Ribonuclease Inhibitor 346 510 IPR032675 -
Mal6g4538 1116 SMART serkin_6 837 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4538 1116 SUPERFAMILY RNI-like 123 451 - -
Mal6g4538 1116 ProSiteProfiles Protein kinase domain profile. 837 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4538 1116 SUPERFAMILY L domain-like 531 718 - -
Mal6g4538 1116 Gene3D Transferase(Phosphotransferase) domain 1 913 1113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4538 Mal-Chr6 128830589 128833939 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4538 34 1116 Receptor kinase-like Gene Family AT3G02130 64.061 0.0 1333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Mal6g4538 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4538 - - gmx:100819882 1685.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4538 6 128830589 128833939 Mal6g4538 6 128830589 128833939 ECH