Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4534 ATGTTTTCATCTTCAATTATTATCAAATGGAGTTCCTTTACTCAATTCATCTTCTTAATCTTCTTCTTAACCTCTCAAAACGACGCCGTTTCATCAATTTCCGACAAATCAACTCTCCTCCGTCTCAAAACTTCCCTCTCCGACCCCACCTCCTTACTCTCTACCTGGACCTCTACTGCCAACCACTGTTCCTTCTATGGCGTTCTATGTGATTCCAACTCCCGTGTTGTTTCTCTCAATATCACCGGTAACGGCGGCGTCGAAGATGGTAAACTGATTTCACATCCTTGCTCTGATTTTAGTAAGTTTCCACTTTATGGGTTTGGAATTAGGAGAAGTTGTGTTGGTTTTAAGGGTTCTTTGTTTGGGAAGTTTCCATCTTTGATTAGTCAGTTAACTGAGCTTAGGGTTTTGAGTTTGCCCTTTAATGGGTTGGAGGGTTTCATTCCTAAAGAGATTTGGAATATGGAGAAACTTGAGGCTCTTGATTTAGAAGGTAATTTGATTAGTGGGTTTATTCCTTTTGATTTTCATGGTTTGAGGAATTTGAGGGTTTTGAATTTAGGGTTTAATAAGATTGTTGGAATGGTGCCTAGTGTTTTAGGTGATATTAATAGTTTGGAGGTTTTGAATTTAGCTTCTAATGGTTTGAATGGTTCTGTTCCTGGTTTTGTTGGGAAGTTTAGAGGGGTGTATATGTCTTTTAATCAGTTTAGTGGTGTTATTCCGGAGGAGATTGGTGAGAATTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAATTCTTTGGTTGAAGAGATTCCGAAGAGTTTGGGGAATTGTGGTGGGTTGAAGACGCTTTTGTTGTATTCAAATTTGTTGGAAGAGGATATTCCTGTTGAATTTGGGAAGCTTAAGAGTCTTGAGGTGTTGGATGTTTCGAGGAATACACTTAGTGGTCCTATTCCGAGGAGTTTAGGGAATTGTACGGAGCTTTCTGTTGTTGTGCTTTCCAACCTTTTCGATCCGGTTGGGGATGGTGAGTTTGTTACTTTGAATGATGAGTTGAACTATTTTGAAGGTGGAATGCCCGAGGAAGTTGTGTCGCTTCCTAAGCTTAGAATTTTGTGGGCTCCAATGGTGAATTTGGAGGGAGGTTTTCCTAGTAGTTGGGGTGCTTGTGCTAACTTGGAGATGGTCAATTTGGCTCTGAATTTCCTCACCGGGGAGTTCCCAAACCGGCTTGGTTTATGCAAAAAGCTGCATTTTCTTGATCTGAACTCAAACAATCTTACTGGGGAGCTTTCGGAGGAACTTCATGTTCCATGTATGACTGTGTTTGATGTTAGTGCGAACATGTTGTCTGGTTCAGTTCCTGATTTCTCCGATTATGTTTGTGCTTCCTATCCTTCCTGGATTGGAAATCTGTTTGAAACTGGTGATGTCGCGTCTCCTTATGCATCTTATTTTTCATCGAAAGCTCATGAGAGAACCCTTTATGCATCATTAGGGGGAAATGGTCTTTCAGTTTTTCACAACTTTGGCCAAAATAACTTAACTGGGATTCAGTCTTTGCCAATAGCACGTGACAGGATGGAGGAAAAGAGTAGTTACACACTTCTCGTTGGAGAGAACAAACTGACGGGAACATTTCCTACATATTTGTTTGAGAAATGCGATGGATTAGATGCTTTGCTTTTGAATGTCAGTTATAATCGGCTATCTGGTGAAATTCCTTCTAATATTAGTGGAATGTGCAAATCACTGAAATTTTTGGATGCATCTAAAAACCAATTTTCCGGACAAATTCCCTTTACTTTAGGGGATTTGGTCTCTCTTGTTTCCCTGAACCTCAGTAGAAACCGGTTACAAGGTCAGATTCCCACCAGCCTCGGACAGATGAAGGATCTAAGGTTTCTCTCTTTGGCGGGTAATAACCTAAGTGGTTCAATTCCTACCAGTCTGGGAGAGTTGTACTCTTTACAAGTCTTGGACCTGTCTACAAACTCTCTTACTGGTGAGATTCCAAATTTTATCGAGAACATGAGAAATCTGACCAATGTTTTGCTTAATAACAACAATCTTTCTGGACACATTCCTGCTGGTTTGGTAAATGTCACTACACTCTCTGCATTCAATGTTTCATTCAATAACTTATCCGGATACTTGCCGTCAAATAGTAGCTTGATCAAATGCAGCAGTGCTGTTGGGAATCCATTTTTAAGTTCCTGCCGCGGAGTTTCATTGACTGTACCATCAGCAAATCAACAAGGGCAGGTTGATGACAGCTCTTCTATTACATCACAAACTACTAGCAAAAATAACGATAATGGTTTCAATGCTATTGAGATAGCATCTATTACTTCTGCTTCAGCCATTGTTTCGGTTCTTATAGCCCTTATTGTTCTGTTTTTCATCACGCGGAAGTGGAAGCCGAGGTCCAGGGTTGGTGGTTCAGTCAAAAGAGAAGTTACAGTGTTCACTGATATCGGCGTCCCATTGACATTTGAAAATGTTGTCCAAGCCACAGGAAATTTCAATGCAAGCAACTGTATTGGGAGTGGAGGATTCGGAGCAACTTATAAGGCAGAGATATCACAAGGAATCTTGGTGGCAGTGAAACGTCTTTCCGTTGGACGTTTCCAAGGTGTTCAACAATTCCATGCAGAGATTAAGACCCTTGGAAGGCTTCATCATCCAAACCTCGTCACTCTTATCGGTTACCATGCTTGCGAGACAGAGATGTTTCTCATATACAATTATCTTCCCGGTGGTAATCTTGAAAAGTTCATCCAGGAGAGATCCACAAGGGCTGTGGATTGGAAAGTTATTCACAAGATTGCATTGGACATAGCACGTGCACTTTCCTATCTGCACGATCAATGTGTACCGCGTGTTCTTCATCGTGATGTCAAGCCTAGCAATATCTTGTTGGACGATGATTTGAATGCTTATCTATCCGACTTTGGACTCGCCAGACTTCTAGGAACTTCGGAGACACATGCTACAACTGGTGTGGCAGGAACATTCGGCTATGTTGCTCCCGAATACGCGATGACATGCCGTGTTTCCGATAAAGCTGATGTATATAGCTACGGCGTGGTGCTTCTTGAGTTGCTATCAGATAAGAAAGTATTGGACCCTTCATTTTCTTCTTATGGAAATGGTTTCAATATAGTAGCATTTGCGTGCATGTTACTAAGGCAAGGAAGGGCAAAGGAGTTTTTCGCTGCAGGGTTATGGGATGTAGGACCAGAACATGATTTGGTAGAGGTTCTACACTTAGCTGTTGTTTGTACTGTTGATTCACTTTCAACTAGACCTACAATGAAACAGGTTGTGAAAAGGTTGAAGCAACTTCAACCCCCATCATGCTAG 3357 0.4144 MFSSSIIIKWSSFTQFIFLIFFLTSQNDAVSSISDKSTLLRLKTSLSDPTSLLSTWTSTANHCSFYGVLCDSNSRVVSLNITGNGGVEDGKLISHPCSDFSKFPLYGFGIRRSCVGFKGSLFGKFPSLISQLTELRVLSLPFNGLEGFIPKEIWNMEKLEALDLEGNLISGFIPFDFHGLRNLRVLNLGFNKIVGMVPSVLGDINSLEVLNLASNGLNGSVPGFVGKFRGVYMSFNQFSGVIPEEIGENCGKLEHLDLSGNSLVEEIPKSLGNCGGLKTLLLYSNLLEEDIPVEFGKLKSLEVLDVSRNTLSGPIPRSLGNCTELSVVVLSNLFDPVGDGEFVTLNDELNYFEGGMPEEVVSLPKLRILWAPMVNLEGGFPSSWGACANLEMVNLALNFLTGEFPNRLGLCKKLHFLDLNSNNLTGELSEELHVPCMTVFDVSANMLSGSVPDFSDYVCASYPSWIGNLFETGDVASPYASYFSSKAHERTLYASLGGNGLSVFHNFGQNNLTGIQSLPIARDRMEEKSSYTLLVGENKLTGTFPTYLFEKCDGLDALLLNVSYNRLSGEIPSNISGMCKSLKFLDASKNQFSGQIPFTLGDLVSLVSLNLSRNRLQGQIPTSLGQMKDLRFLSLAGNNLSGSIPTSLGELYSLQVLDLSTNSLTGEIPNFIENMRNLTNVLLNNNNLSGHIPAGLVNVTTLSAFNVSFNNLSGYLPSNSSLIKCSSAVGNPFLSSCRGVSLTVPSANQQGQVDDSSSITSQTTSKNNDNGFNAIEIASITSASAIVSVLIALIVLFFITRKWKPRSRVGGSVKREVTVFTDIGVPLTFENVVQATGNFNASNCIGSGGFGATYKAEISQGILVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGGNLEKFIQERSTRAVDWKVIHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDLNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKVLDPSFSSYGNGFNIVAFACMLLRQGRAKEFFAAGLWDVGPEHDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSC* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4534 1118 Gene3D Ribonuclease Inhibitor 341 502 IPR032675 -
Mal6g4534 1118 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Mal6g4534 1118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 959 971 IPR008271 GO:0004672|GO:0006468
Mal6g4534 1118 SUPERFAMILY L domain-like 56 227 - -
Mal6g4534 1118 Gene3D Ribonuclease Inhibitor 32 228 IPR032675 -
Mal6g4534 1118 Pfam Protein kinase domain 842 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4534 1118 SUPERFAMILY Protein kinase-like (PK-like) 822 1110 IPR011009 -
Mal6g4534 1118 SUPERFAMILY L domain-like 229 719 - -
Mal6g4534 1118 Gene3D Transferase(Phosphotransferase) domain 1 915 1115 - -
Mal6g4534 1118 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 14 1117 - -
Mal6g4534 1118 CDD STKc_IRAK 845 1113 - -
Mal6g4534 1118 SMART serkin_6 839 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4534 1118 Pfam Leucine Rich Repeat 300 322 IPR001611 GO:0005515
Mal6g4534 1118 Pfam Leucine Rich Repeat 252 274 IPR001611 GO:0005515
Mal6g4534 1118 ProSiteProfiles Protein kinase domain profile. 839 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4534 1118 Pfam Leucine rich repeat 605 664 IPR001611 GO:0005515
Mal6g4534 1118 Pfam Leucine rich repeat 177 217 IPR001611 GO:0005515
Mal6g4534 1118 Gene3D Phosphorylase Kinase; domain 1 802 914 - -
Mal6g4534 1118 Gene3D Ribonuclease Inhibitor 506 743 IPR032675 -
Mal6g4534 1118 SMART LRR_typ_2 156 179 IPR003591 -
Mal6g4534 1118 SMART LRR_typ_2 250 274 IPR003591 -
Mal6g4534 1118 SMART LRR_typ_2 298 322 IPR003591 -
Mal6g4534 1118 SMART LRR_typ_2 603 627 IPR003591 -
Mal6g4534 1118 SMART LRR_typ_2 651 674 IPR003591 -
Mal6g4534 1118 SMART LRR_typ_2 675 699 IPR003591 -
Mal6g4534 1118 SMART LRR_typ_2 180 203 IPR003591 -
Mal6g4534 1118 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 1117 - -
Mal6g4534 1118 ProSitePatterns Protein kinases ATP-binding region signature. 845 867 IPR017441 GO:0005524
Mal6g4534 1118 Gene3D Ribonuclease Inhibitor 229 334 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4534 Mal-Chr6 128810129 128813485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4534 34 1118 Receptor kinase-like Gene Family AT3G02130 63.163 0.0 1335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Mal6g4534 Pkinase 3.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4534 - - gmx:100819882 1642.86