Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4532 ATGATTAACATTCCAAAAGAAGTTGAATTTCCATTAAAACAAGAAGTTCTTCCACCAAAGGCTTCAACTACCTCATCATCATCATCAACATCACAATGGTTAAAGCTAAAAGATCCAAGAATTGTGAGGGTATCTAGAGCTTTTGGAACAAAAGATAGACATAGCAAAGTATACACAATAAAAGGACTAAGAGATAGAAGGGTAAGGCTTTCAATCCAAACAGCAATTCACCTCTATGATCTTCAAGATAGGTTAGGGCTAAATCAACCTAGCAAGGTTGTTGATTGGTTGCTTAATATAGCTAAGGATGAAATTGATGAGCTTCCACCACTTCCAATACCTCAAGGAAACTTCACCTTAGGTTATCCATCTTTTGCTAGTAATGATGATGTTAGGCAAAACAACACTTCAATTTGGAAATCAAATTCTAAACAAGGTTTGGGAGAAATTGTTACTAACAAAGAAAATTGGATGAATAGAGGTGAAGAGGAGAAAGAGGAGAATGATAATTGTGATTATGCAAAACATGTTTCGCCAAATACTCAATTACCACATTTCGTACCTGACAACGTCTCAAATATGATTATCTCTCGTGGAGCAAATCAACCTTCTTTTTTGGGATTGTTGAACACTATGCCACTTGGTTATCAATTGGAGCCTTCATCTAGTCATGTTCCTCAAATATCAAATTTTGGATTTGTTAACCAAATTAAAGATATAGATGGAATGAATGTTGTACCCTTTCCATCATCATTGTCTTTGTCAACACAACAATATTTTCCTTCACATGTTGGAGCAGTAGAGATGGATCCAAGTCAAATCAATTACCACTATGATCAAATGTTGAGTTCAAGTTCTCAAAACAATTCTTCCAATCCAACTCAACAACTCATGAGGGTGACTCCTACATTTTTTCATTCTCTCAACAACAGTGAAAGTTATTCCCAAAAAGACCAAGATTTTCCTTCCAAGTGA 975 0.3528 MINIPKEVEFPLKQEVLPPKASTTSSSSSTSQWLKLKDPRIVRVSRAFGTKDRHSKVYTIKGLRDRRVRLSIQTAIHLYDLQDRLGLNQPSKVVDWLLNIAKDEIDELPPLPIPQGNFTLGYPSFASNDDVRQNNTSIWKSNSKQGLGEIVTNKENWMNRGEEEKEENDNCDYAKHVSPNTQLPHFVPDNVSNMIISRGANQPSFLGLLNTMPLGYQLEPSSSHVPQISNFGFVNQIKDIDGMNVVPFPSSLSLSTQQYFPSHVGAVEMDPSQINYHYDQMLSSSSQNNSSNPTQQLMRVTPTFFHSLNNSESYSQKDQDFPSK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4532 324 Pfam TCP family transcription factor 49 168 IPR017887 -
Mal6g4532 324 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 317 IPR005333 GO:0003700
Mal6g4532 324 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Mal6g4532 324 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4532 Mal-Chr6 128761733 128762707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4532 20 120 TCP Transcription Factor Family AT3G02150 73.267 9.75e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal6g4532 TCP 6.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4532 - - aprc:113867214 347.821