Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4518 ATGTCTTCCTCTTCGGGATGCAGAGGTGGCGACTCAAACAATCGCTCACTCCCTTCGTCGTCCTTTTCATCGACACACAGCCATGTTGAGCCACACAGACCAGGACCGTTGATGTCTTCCTTATCGTCCAGTACCAGGATTGTTGACCCAGTCAGATCCATCATTCATCCACAACTTTACCGGGCTGTGCAAAAATGCCGCCAAAAACAGGATGCAGGAAAAAAACGTCAAAAAGATGATGTGCGAAAAAGATCAATAAGGAGATATGAAGTGTTCTTAAGTTTCAGAGGCAAAGATACTCGTGCTTCCTTCACTTCACATCTCTATGCTTCTCTTCGAAATGCCGGAATTAATGTTTTCAGGGATGATGATTCGCTTAAATGGGGAAATGTCATTTCAGCATCACTACTACAGGCAATTGAAGAATCTCAAATTGCTGTGATAGTCTTTTCGAAAAATTATGCAGGTTCGCGATGGTGTCTGGATGAGTTGGTGAAGATAATGGAGTGTTTTAGAACCATAGGGCAGTTGGTGCTACCAATTTTCTATGGTGTAGATCCATCTGACGTACGTCACCAAAGAGGTGAGTTTGGCAAAGCATTTGAAAGTCTCTTGAGTAGAATTCCAAATAATAAAGGAGGTATGTTTGCAAAAGCGGTTAATTTTTTCCGGGACAGTAGCCGTAACGACGAGTTGCCAAATCAGGTGCTGAGATGGAAAGAAGCACTTGGTCAGGCAGCAGGGATTGCAGGGTCTGTAGTGCTAAATTCCAGGAATGAAAGTGATGCTATCAAGGATATTGTTGAATATGTTACATGTTTGCTCAACAAGAGGGACTTGTTTGTTGCTAATAATCCAGTGGGAGTTGAACATCGAGTGCGAGATATGATTCAACTGCTAAACATCTCACAATCAGATGATGTTCTAATACTCGGGATGTGGGGTATGGGTGGAGTTGGGAAAACCACCATTGCAAAAGCTATATACAATAAAATTGGCCGCAAATTTGAAGCTAGAAGCTTCTTAGCAAATGTTAGGGAGGTTTGGGAGAAAAAAGACAGACAGATGTCTTTACAAGAACAACTTCTCTCTAATATTTGCATGGATATGACACCCAAGATAGAAAACATTGATAAAGGAAAAACTATATTAGAGGATAGACTACGTTATAAAAGTGTACTTCTTGTACTTGATGATGTGAATTCATTGGATCAATTGAATGCTTTGTGTGGAAGTCGTAAATGGTTTGGTTCGGGGAGTAGAATAATCATTACAACTAGAGATATGCATTTACTTAGAGGGAGTAGAGTTGACCAATTATACCCAATGAAAGAAATGGATGAAAGTGAATCAATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGTGAGACCTAAAGAAGATTTTGCTGAAATTTCTATAAATATTGTTGAGTATTCTGGGGGACTGCCGCTAGCTCTAGAAGTCCTTGGGACTCTTTTGTTTGGTAGGCCAGTAAAAGAGTGGAAGTGTGTATTGGACAAACTCAAAAGAATTCCTAATAATCAAGTTCAAGAGAAGTTAAAAATAAGCTATGATGGTTTAAATGATTTTACTCAGAAAGATATATTCCTTGACATAGCTTGTTTTTTTATTGGGATGGACAGAAATGATGTTATACATATATTAAATGAATGTGAACTTTATCCAGAAAATGGAATAAATGTCCTTGTGGAGCGAAGCCTTGTCACTGTTGATGATATGAACAAACTTAGAATGCATGATTTGCTGCGAGATATGGGAAGAGAAATCATTCGTGAAAAATCACCAATACGTCTTGAGGAGCATAGCAGGTTGTGGTTTAGTAAGGATGTGCTTGATGCATTATCAAAACGAACTGGAACAAAATTTGTCGAGGGACTTGCTTTGATGTTGCCAAGTGCTAATACAGAACATTTTAGTACTAAGGCATTTAAGAAGATGACGGAACTCAGATTGCTTCAACTTGCTGGAGTAAAGCTTGATGATGACTTTGAATACCTTTCAAGAAATTTGAGATGGATTTCTTGGAATCGATTCCAAGAACCATGTATACCTACAGGCTTTTATTTAGGAAATTTAGTTTCTATTGAGTTAGAAAACAGCAACATTGAATTTCTCTGGAAAGAAACCCAGAGTCTGGAGAAGCTGAAAATTCTTATATAA 2184 0.386 MSSSSGCRGGDSNNRSLPSSSFSSTHSHVEPHRPGPLMSSLSSSTRIVDPVRSIIHPQLYRAVQKCRQKQDAGKKRQKDDVRKRSIRRYEVFLSFRGKDTRASFTSHLYASLRNAGINVFRDDDSLKWGNVISASLLQAIEESQIAVIVFSKNYAGSRWCLDELVKIMECFRTIGQLVLPIFYGVDPSDVRHQRGEFGKAFESLLSRIPNNKGGMFAKAVNFFRDSSRNDELPNQVLRWKEALGQAAGIAGSVVLNSRNESDAIKDIVEYVTCLLNKRDLFVANNPVGVEHRVRDMIQLLNISQSDDVLILGMWGMGGVGKTTIAKAIYNKIGRKFEARSFLANVREVWEKKDRQMSLQEQLLSNICMDMTPKIENIDKGKTILEDRLRYKSVLLVLDDVNSLDQLNALCGSRKWFGSGSRIIITTRDMHLLRGSRVDQLYPMKEMDESESIELFSWHAFKQVRPKEDFAEISINIVEYSGGLPLALEVLGTLLFGRPVKEWKCVLDKLKRIPNNQVQEKLKISYDGLNDFTQKDIFLDIACFFIGMDRNDVIHILNECELYPENGINVLVERSLVTVDDMNKLRMHDLLRDMGREIIREKSPIRLEEHSRLWFSKDVLDALSKRTGTKFVEGLALMLPSANTEHFSTKAFKKMTELRLLQLAGVKLDDDFEYLSRNLRWISWNRFQEPCIPTGFYLGNLVSIELENSNIEFLWKETQSLEKLKILI* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4518 727 ProSiteProfiles TIR domain profile. 87 275 IPR000157 GO:0007165
Mal6g4518 727 SUPERFAMILY L domain-like 636 726 - -
Mal6g4518 727 Gene3D - 274 439 IPR027417 -
Mal6g4518 727 Gene3D - 86 273 IPR035897 -
Mal6g4518 727 MobiDBLite consensus disorder prediction 1 42 - -
Mal6g4518 727 Pfam NB-ARC domain 290 522 IPR002182 GO:0043531
Mal6g4518 727 SMART till_3 88 249 IPR000157 GO:0007165
Mal6g4518 727 SUPERFAMILY "Winged helix" DNA-binding domain 516 622 IPR036390 -
Mal6g4518 727 MobiDBLite consensus disorder prediction 1 28 - -
Mal6g4518 727 PRINTS Disease resistance protein signature 387 401 - -
Mal6g4518 727 PRINTS Disease resistance protein signature 718 727 - -
Mal6g4518 727 PRINTS Disease resistance protein signature 480 494 - -
Mal6g4518 727 PRINTS Disease resistance protein signature 310 325 - -
Mal6g4518 727 SUPERFAMILY Toll/Interleukin receptor TIR domain 87 204 IPR035897 -
Mal6g4518 727 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 94 711 - -
Mal6g4518 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 273 540 IPR027417 -
Mal6g4518 727 SMART AAA_5 307 447 IPR003593 -
Mal6g4518 727 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 94 711 IPR044974 GO:0006952
Mal6g4518 727 Gene3D - 445 529 IPR042197 -
Mal6g4518 727 Pfam TIR domain 89 208 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4518 Mal-Chr6 128603423 128607390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4518 82 724 WRKY Transcription Factor Family AT4G12020 29.367 3.42e-67 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4518 - - cam:101494533 928.702