Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4516 ATGTCATATAATCACTCAGATTTGCTAAGTGATGGCATATACACAAAGAATCTGTCGAAAGCATTAAGGATCCATGATGTGTTCTTAAGTTTCCGAGGGGAAGATACTCGTGCTTCCTTCACTTCACATCTTAACACTTCTCTTCTAAATTCTGGAATTAAAGTTTTTAGGGACGATGATTCGCTTCAAAGGGGAGATGCCATTTCAAAATCAATATATCGAGCAATAGAACAATCACGAATTGCTGTCATTGTTTTCTCGAAGAATTATGCTGATTCACGATGGTGTCTAGATGAGTTGGTGAAGATAATAGAATGTTCCAAATTTATAGGGCAAGTTGTTTTGCCAATATTCTACGGTGTAGATCCTTCGGAAGTTCGACACCAAAAAGGTGAGTTTGGCAAAGCATTTCAAAGTCTATTGACTAGACTTTCAAATACGAAAGGACTTTTCAAAGTGTTAAACTTCAAATCCGGGTCGCCGAATATGGAGCTGGAACGGAGTTGGACAGCGGCGCTTCATGAGGTAGCAGGGTTTGCAGGGTTTGTAGTGCTAAATTCCAGGAATGAAAGTGAGGCTATCAAGGATATTGTTGAAAAAATTGTGCGTTTGCTAAACAAGACAGACTTGTTCGTTGCTAATAATCCAGTGGGAGTTGAACTTCGAGTGGAAGATATGATTCAATTGTTATACAAAAATATACCGCAATTGCAACACTTCCAACCAATGCAAGCTCCGTTTAAACCGCTACTGCAAGACCAACAAATGCAAGCTCCAATTCAACCGCTACATTTCCAACCAATGCAAGCTCTGTTTCAACCGCTACTGCAAGACCAACAAATGCAAGCTCCGTTTCAACCACTACAGTTCCAACAAATGCAAAATCTGTTTCAACCGCTACTGCAAGACCAACAAATGCAAGCTCCAATTCAACCGCTACATTTCCAACCAATGCAAGCTCTGTTTCAACCGCTACTGCAAGACCAACAAATGCAAGCTCCATTTCAACCGCTACAGTTCCAACAAATGCAAGTGCAAGCTCCATTTCAAAAACAACAATCAAAAGATGTTCTACTACTAGGGGTGTGGGGTATGGGAGGGATTGGGAAAACAACTATTGCAAAAGCCATTTACAACAAAATTGGCCACAATTTTGATGGTAGGAGCTTCGTTGCAAATATTAGGGAAGTTTGGGAGCAAAATATTCGACAAGTGTATTTACAAGAACAAATTCTATCTGATATTTGCAAAGAAATAACGACCAAGATACACAACATTGAGGAAGGAAAAAATAAATTAAAGGATATACTTTGTCATAAAAGAGTACTTCTTGTACTTGATGATGTGAATACATTGGATCAATTGAATGCTTTGTGTGGAAGTCATCAATGGTTTGGTTCGGGTAGTAGAATAATTATCACAACTAGAGATATGAATATACTTAGAGGGAATAGAGTTGATGAAGTATACACAATGAAAAAAATGGGTGAAAGTGAATCAATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCGAGCCCTAGAGAAGATTTTGCTGAAATTTCAAGAAATGTAGTGGACTATTCCGGGGGATTGCCGCTAGCTCTTGAAGTCCTTGGGTCATATTTGTTTGATAGGGGAATAACAGAATGGGGGAGTGTTTTGGAAAAACTCAAAAAAATTCCCAATGATCAAGTACATAAGAAGTTAAAAATAAGTTATGATGCTTTAAATGATGACACTGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGTCCGAAATGATGTTATACATATATTAAATGGGTGCGAACTTTATGCAGAAATTGGAATAAATGTTCTTATGGAGCGTAGCCTTGTGACTGTTGATGATATGGACAGGCTTGGAATGCATGATTTGTTGCGAGATATGGGAAGAGAAATAATTCGTGAGAAATCACCAAAGGATCCCGCGGAGCGTAGCAGGTTATGGTATAGTAAAGACGTGCTTGATGTGTTATCAGAACAAACGGGAACAAAAGTTGTTGAGGGGCTGACTTTGAAGTTGCGAAGAGCTAGTGCAAAATGTTTTAGTACCAAAGCATTTAAGCATATGACAAAACTGAGATTGCTTCAACTTGCTGGAGTACAACTTGATGGGAATTTTGAATATCTTTCAAGAAATTTGAGATGGCTTTATTGGAATGGATTTCCTTTAACATGCATACCTACAAACTTTTATCAAGGAAATTTAGTTTCCATTGAGTTAGTAAACAGCAATGTCAAATTTCTATGGAAAAAGACTCAGAAGATGGAGAAGTTGAAAATTCTAAACCTTAGTCATTCTCATTCTCTGACTCAGACCCCGGACTTTTCAAACATGCCTAATCTTGAAAAGTTAGTATTGACTGATTGTCCAAAGTTGTCCGAGATTTCTCCTAGCATTGGACATCTCAATAAAGTTCTTCTGATAGATTTGGAAGATTGTATTAACATAAGTAGACTCCCAAGAAGCATATACAAGTTAAAATCTCTGAAAACTCTTATTCTTTCTGGGTGTTTAAAGATCGACAAGTTGGAAGAGGACTTAGAAGATATGGAATCTTTAACCACCTTAATTGCAAATAATACTGCAATAGCAAGAGTTCCCATTTCAGTAGTAAGGTCCAAAAGCATTGGATATATTTCTTTGTGCGGTTATGAAGGATTCTCATGTGACGTGTTTCCAGCTATCATTTGGTCTTGGATGTCACCGACAAATAATCTCCCATCCCCATTTCAAACATCTGCTGGCATGTCATCTCTTGTTCCTTTAGATGTACAAAGTGGTTCTCATGAACTGCCATCTATGTCCAAGTACCTTCCATGGCTTCGATGTCTTTGGGTGGAGTGTGACTCAGAAATTCAACTTTCTCGAGACACAAAAATAATTTTGGATGCCTTATATGCCCCAAATCCTGAAGAGTTGGAATCAACTTCTACTTCACAAGTGTCAAATATGAAAACTTCTGCACTAATTCAATACTATAGTCAGGTTCACATTTCAGGATCAAAATCTTCCTTGAAATCTTTGTTTATTCAAATTGGAATGAATTGCCAAGTCACCAATATTCTGAAAGACAACATTTTACAGAATATGGGCGTCAATGGGTGTGGTGAACGTATGCTCCCTGGTGACAGTTATCCAGATTGGTTGACCTTCAATTTCAAAGGCTCTTCTGTAATTTTTGAAGTCCCTCGAGTGCAAGGGCGTAACTTAAAGACAATGATATGCGTTATCTATTCTTCAACCCCTCGTAACATAGCATCAGATGGCCTTAAAAATGTGATGTTGAAAAATTACACAAAGGCCACCATTCAACTCTATAAGAGAGATGCCTTAGTCTCTTTTGAAGATGAGGAGGGTGAGACGGTAGTATCAAGTATAGAACCGGGAAACAAAGTAGAGGTGGTTGTTGTTTTCGGGAAAGGTTTCATTGTGAAGGAAACAATAGTTTATCTTGTATATGATCAACCAATTGCAGAAAAAATGGAGAAATGTCGAGAACAAGAAAAAGACGATATTATGGTTAGTGGTGATGCTATTGAATGTATTGTCGGGACAAGCTGTTCGCAAATGGAATCCGTCGATGAAAATGTTGGCGCTGTTGGTTGTTGTGGATTGATCAAATATAGTTTCAGAAAGTGGATTACAGATTTCATGTGTAAATTAGTGGAGTGCCGGGGAAAGTCGAGTTGGCCTTGA 3738 0.3807 MSYNHSDLLSDGIYTKNLSKALRIHDVFLSFRGEDTRASFTSHLNTSLLNSGIKVFRDDDSLQRGDAISKSIYRAIEQSRIAVIVFSKNYADSRWCLDELVKIIECSKFIGQVVLPIFYGVDPSEVRHQKGEFGKAFQSLLTRLSNTKGLFKVLNFKSGSPNMELERSWTAALHEVAGFAGFVVLNSRNESEAIKDIVEKIVRLLNKTDLFVANNPVGVELRVEDMIQLLYKNIPQLQHFQPMQAPFKPLLQDQQMQAPIQPLHFQPMQALFQPLLQDQQMQAPFQPLQFQQMQNLFQPLLQDQQMQAPIQPLHFQPMQALFQPLLQDQQMQAPFQPLQFQQMQVQAPFQKQQSKDVLLLGVWGMGGIGKTTIAKAIYNKIGHNFDGRSFVANIREVWEQNIRQVYLQEQILSDICKEITTKIHNIEEGKNKLKDILCHKRVLLVLDDVNTLDQLNALCGSHQWFGSGSRIIITTRDMNILRGNRVDEVYTMKKMGESESIELFSWHAFKQASPREDFAEISRNVVDYSGGLPLALEVLGSYLFDRGITEWGSVLEKLKKIPNDQVHKKLKISYDALNDDTEKEIFLDIACFFIGMVRNDVIHILNGCELYAEIGINVLMERSLVTVDDMDRLGMHDLLRDMGREIIREKSPKDPAERSRLWYSKDVLDVLSEQTGTKVVEGLTLKLRRASAKCFSTKAFKHMTKLRLLQLAGVQLDGNFEYLSRNLRWLYWNGFPLTCIPTNFYQGNLVSIELVNSNVKFLWKKTQKMEKLKILNLSHSHSLTQTPDFSNMPNLEKLVLTDCPKLSEISPSIGHLNKVLLIDLEDCINISRLPRSIYKLKSLKTLILSGCLKIDKLEEDLEDMESLTTLIANNTAIARVPISVVRSKSIGYISLCGYEGFSCDVFPAIIWSWMSPTNNLPSPFQTSAGMSSLVPLDVQSGSHELPSMSKYLPWLRCLWVECDSEIQLSRDTKIILDALYAPNPEELESTSTSQVSNMKTSALIQYYSQVHISGSKSSLKSLFIQIGMNCQVTNILKDNILQNMGVNGCGERMLPGDSYPDWLTFNFKGSSVIFEVPRVQGRNLKTMICVIYSSTPRNIASDGLKNVMLKNYTKATIQLYKRDALVSFEDEEGETVVSSIEPGNKVEVVVVFGKGFIVKETIVYLVYDQPIAEKMEKCREQEKDDIMVSGDAIECIVGTSCSQMESVDENVGAVGCCGLIKYSFRKWITDFMCKLVECRGKSSWP* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4516 1245 Pfam TIR domain 25 206 IPR000157 GO:0007165
Mal6g4516 1245 PRINTS Disease resistance protein signature 359 374 - -
Mal6g4516 1245 PRINTS Disease resistance protein signature 767 783 - -
Mal6g4516 1245 PRINTS Disease resistance protein signature 529 543 - -
Mal6g4516 1245 PRINTS Disease resistance protein signature 436 450 - -
Mal6g4516 1245 Coils Coil 854 874 - -
Mal6g4516 1245 Pfam NB-ARC domain 346 576 IPR002182 GO:0043531
Mal6g4516 1245 SMART till_3 24 160 IPR000157 GO:0007165
Mal6g4516 1245 Gene3D - 21 213 IPR035897 -
Mal6g4516 1245 SUPERFAMILY L domain-like 685 968 - -
Mal6g4516 1245 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 344 1167 IPR044974 GO:0006952
Mal6g4516 1245 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 232 IPR044974 GO:0006952
Mal6g4516 1245 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 140 IPR035897 -
Mal6g4516 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 589 IPR027417 -
Mal6g4516 1245 ProSiteProfiles TIR domain profile. 23 205 IPR000157 GO:0007165
Mal6g4516 1245 Gene3D - 330 488 IPR027417 -
Mal6g4516 1245 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 344 1167 - -
Mal6g4516 1245 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 32 232 - -
Mal6g4516 1245 Gene3D Ribonuclease Inhibitor 683 930 IPR032675 -
Mal6g4516 1245 Gene3D - 495 578 IPR042197 -
Mal6g4516 1245 SUPERFAMILY "Winged helix" DNA-binding domain 565 671 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4516 Mal-Chr6 128583180 128588301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4516 352 834 WRKY Transcription Factor Family AT5G45050 34.180 7.70e-72 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4516 - - cam:101512894 1278.46