Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4497 ATGATGAAGAAAATTGTGCTAAAGGTAGAGATACATAATGACAGAATCAAAAACAAAGCTATGAAGGCAGTCTCTAGCTTGTCGGGGGTTGAATCAATTTCAATAAACATGAAGGACAAGAAAATAACGGCAATAGGAGATATTGATCCAGTACGTGTAGTGGCTAAGATAAGGAAGTTTTGTCATGCTGAAATACTTTCTGTTGGACCAGCTAAAAGGATTCATGACGTGTTCTTAAGTTTTAGAGGGGAAGATACTCGCTCATCCTTCACTTCGCATCTCTATACCGCTCTTCAAAATGCTGGAATTGAAGTTTTTAGAGACGATAGTAAGCTTCAAAGAGGAGATCACATTTCAAAATCATTATCAAATACAATTGAACAGTCTCAAATTTCTTTAATTGTTTTTTCAAAAAATTATGCCAATTCTAGATGGTGTTTGGATGAATTGGAAAAAATAATGAAGTGTCATAGAACCATAGGACAAAAGGTTGTGCCAGTGTTCTACCATGTAGATCCCTCTGAAGTGCGTCATCAGACAGGAGAGTTTGGAATATCTTTTCAAAGTCTTTTGAACAAAATTTCAAACGAGGTGGAATTAGTGCTAAGTTGGAGAGAAGCTCTTCGTCAGGCAGCTAGCATAGCAGGGTTTGTAATACCCAACTCCAGAAATGAAAGTGAGGCTATCAAACACATTGTTGAAAACGTGGTACGTTTGCTTGACAAAACAGATTTGTTTATTGCGAATAATCCAGTGGGAGTTGAATCTCGTGTGGAAGATATGGTTCAATGGCTAGACCAAGATATTGAACAATCAGATGATGTTCTAATACTAGGGATGTGGGGTATGGGAGGCGTTGGTAAAACAACCATTGCGAAAGCCATTTACAACAAATTTGGCCGCAATTTTGAAGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGAATAATGTTGGACAAATACAAAACATTGAGTCAGGAAAAAATATATTAAAGGATAGACTATGCCATAAAAGAGTGCTAATCGTACTTGATGATGTGAATTCATTGGAGCAATTGAATGCTTTGTGTGGAAATCGTAAATGGTTTGGTTCACGGAGTCGAATAATCATCACAACCAGAGATAGGCATATACTTAGTGGAAATAGAGTTAACCACGTTTTCCAAATGAAACACATGGATGAAAATGAATCAATTGAGTTATTTAGTTGGCATGCATTCAAGCAGGCAACTCCTACAAAAGATTTTGCTCAAATTTCTAGAAATGTTGTTGAATATTCTGGGGGATTGCCTTTAGCTTTGGAAGTCCTTGGGTCATATTTGTTTGAGAGGGGAGTAACTGAGTGGCAGTGTGTATTGGAGAAACTTAAAAGAATTCCTAATGATCAAGTACAAAAGAAGTTAAAACTAAGCTATGATGCTTTAAAAGATGATACGGAGAAAGAAATATTCCTGGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTACTCTTATATTAAATGGATGTGGACTTTTTGCTGAAATTGGAGTAAGTGTCCTTGTTGAGCGATGCCTTGTGACTGTTGATGATAGGAACAGACTTGTAATGCATGATTTAGTACGAGATATGGGAAGAGAAATCATTCGTGAGAAATCACCAAAGGAGCCTGAGGAGCGTAGCAGGTTGTGGTTTAATAAGGATGTGCTTGACGGAACAAAAGCTGTTGAGGGACTAGCTTTGAAATTGCCAACAACAAATGGAAAAGGTTTTAGTACCAAAGCATTCAAGAAGATGAAAAAACTCAGACTGCTTCAACTTGCTGGTGTACAACTAGATGGGGACTTTGAATATCTTTCAAAAAAATTGAGATGGCTTTCTTGGAATGGATTTCCTTTGAAATGCATTCCTTCAAGCTTTTATCAAGAAAATTTAGTTTCCATTGAGTTAGTTAACAGCAAGGTCAAACATGTGTGGGAAGAGCCCCAGAGGCTAGAGAACCTGAAAATTCTCAATCTTAGTCATTCTCATTATCTGACAAAGACCCCAGACTTTTCAAACATGCCTAATCTTGAACAGTTAGTACTCACAGATTGTCCAAAGTTGTCTGAAGTTTCCCATAGTATTGGAGATCTCAATAAAATACTTATGATAAATTTGGAAGATTGTATTAGCCTTCAAAGCCTTCCGAGAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCATTCTTTCTGTGTGTTTAATGATTGACAAATTGGAAGAAGATTTGGGACAAATGGAATCTTTATCCACATTGATTGCAAATAACACTGCAATAACAAGAGTGCCGTTTTCCGTAGTAAGGTCCAAAAACATTGCATATATTTCTTTGTGTGACTATGAAGGATTCTCACATGATGTGTTTCCGGCTATCATTTGGTCTTGGATGTCACCAACAAATAATCTCCCATCTCGATTTCAAACATCTCTTGTTCCTTTGAATGCATCAAATATTAGTTCCCTTGACCTATCATCTATGTCAAAGTACCTTCCATGGCTTCGATGTCTTTGGGTTGAGTGTGGCTCAGAACTTCAACTTTCTCAAGACACAAAAAGAATTTTGGATGCCTTATATGCTACAAATTCTAAAGAATTAGAATCATCTTCTACTTCTCAAGTGTCAAATATGAAAACTTCTTCACCAATTCAATGTTGCAGTCAAGTTCACATTTCTGGATCAAAAACTTCTCTAAAATCTTTGTTTATTCAAATTGGAATGAATTGCCAAGTCACCAACATTCTGAAAGAGAACATTTTACAGAATATGGATGTCAATGAGAGTGGTGGTTGTTTCCTCCCTGGTGATAGTTATCCAAATTGGTTAACCTTTGATTCTGAAGGTTCTTCTGTAACTTTTGAAGTCCCTCAAGTGGAAGAACGTAACTTGAAGGCAATGATGTGCATTGTCCATACTTCAACTCCACATAACATAACATCAAGTGGCCTTAAAAACATGTTAGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAGAGTGAGTCATTAGTCTCCTTTGGAGATGAAGAGGGGCAGAGTGTAGTATCAAGTATAGAACCTGGTAATAAAGTGGAGGTCATTTTTGTTTTCGAGAATGATTTCATTGTGAAGAAGACAACAATTTATCTGGTATATGATGCACACAATTTGAATGTCATTGCTTGTGGAGGTGATGAAAATGAACACTCTGTAAAGATATTCTCTAATGAAGATGAGCGCACCGATGACTTTGATCAGAACAGAAAGAAGAAAAATCAAGTCGAATGA 3303 0.3675 MMKKIVLKVEIHNDRIKNKAMKAVSSLSGVESISINMKDKKITAIGDIDPVRVVAKIRKFCHAEILSVGPAKRIHDVFLSFRGEDTRSSFTSHLYTALQNAGIEVFRDDSKLQRGDHISKSLSNTIEQSQISLIVFSKNYANSRWCLDELEKIMKCHRTIGQKVVPVFYHVDPSEVRHQTGEFGISFQSLLNKISNEVELVLSWREALRQAASIAGFVIPNSRNESEAIKHIVENVVRLLDKTDLFIANNPVGVESRVEDMVQWLDQDIEQSDDVLILGMWGMGGVGKTTIAKAIYNKFGRNFEGRSFLANIREVWENNVGQIQNIESGKNILKDRLCHKRVLIVLDDVNSLEQLNALCGNRKWFGSRSRIIITTRDRHILSGNRVNHVFQMKHMDENESIELFSWHAFKQATPTKDFAQISRNVVEYSGGLPLALEVLGSYLFERGVTEWQCVLEKLKRIPNDQVQKKLKLSYDALKDDTEKEIFLDIACFFIGMDRNDVTLILNGCGLFAEIGVSVLVERCLVTVDDRNRLVMHDLVRDMGREIIREKSPKEPEERSRLWFNKDVLDGTKAVEGLALKLPTTNGKGFSTKAFKKMKKLRLLQLAGVQLDGDFEYLSKKLRWLSWNGFPLKCIPSSFYQENLVSIELVNSKVKHVWEEPQRLENLKILNLSHSHYLTKTPDFSNMPNLEQLVLTDCPKLSEVSHSIGDLNKILMINLEDCISLQSLPRSIYKLKSLKTLILSVCLMIDKLEEDLGQMESLSTLIANNTAITRVPFSVVRSKNIAYISLCDYEGFSHDVFPAIIWSWMSPTNNLPSRFQTSLVPLNASNISSLDLSSMSKYLPWLRCLWVECGSELQLSQDTKRILDALYATNSKELESSSTSQVSNMKTSSPIQCCSQVHISGSKTSLKSLFIQIGMNCQVTNILKENILQNMDVNESGGCFLPGDSYPNWLTFDSEGSSVTFEVPQVEERNLKAMMCIVHTSTPHNITSSGLKNMLVKNYTKATIQLYKSESLVSFGDEEGQSVVSSIEPGNKVEVIFVFENDFIVKKTTIYLVYDAHNLNVIACGGDENEHSVKIFSNEDERTDDFDQNRKKKNQVE* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4497 1100 SMART AAA_5 274 396 IPR003593 -
Mal6g4497 1100 SUPERFAMILY L domain-like 579 896 - -
Mal6g4497 1100 SUPERFAMILY Toll/Interleukin receptor TIR domain 70 217 IPR035897 -
Mal6g4497 1100 Gene3D - 243 389 IPR027417 -
Mal6g4497 1100 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 81 1057 - -
Mal6g4497 1100 Pfam NB-ARC domain 255 476 IPR002182 GO:0043531
Mal6g4497 1100 PRINTS Disease resistance protein signature 661 677 - -
Mal6g4497 1100 PRINTS Disease resistance protein signature 277 292 - -
Mal6g4497 1100 PRINTS Disease resistance protein signature 336 350 - -
Mal6g4497 1100 PRINTS Disease resistance protein signature 429 443 - -
Mal6g4497 1100 SUPERFAMILY HMA, heavy metal-associated domain 1 60 IPR036163 GO:0046872
Mal6g4497 1100 CDD AAA 259 377 - -
Mal6g4497 1100 Gene3D - 394 478 IPR042197 -
Mal6g4497 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 489 IPR027417 -
Mal6g4497 1100 Gene3D - 1 72 - -
Mal6g4497 1100 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 81 1057 IPR044974 GO:0006952
Mal6g4497 1100 SUPERFAMILY "Winged helix" DNA-binding domain 465 568 IPR036390 -
Mal6g4497 1100 CDD HMA 22 59 IPR006121 GO:0046872
Mal6g4497 1100 ProSiteProfiles TIR domain profile. 73 240 IPR000157 GO:0007165
Mal6g4497 1100 Gene3D Ribonuclease Inhibitor 575 799 IPR032675 -
Mal6g4497 1100 Gene3D - 73 242 IPR035897 -
Mal6g4497 1100 SMART till_3 74 214 IPR000157 GO:0007165
Mal6g4497 1100 MobiDBLite consensus disorder prediction 1081 1100 - -
Mal6g4497 1100 Pfam TIR domain 75 238 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4497 Mal-Chr6 128270270 128277306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4497 75 797 WRKY Transcription Factor Family AT4G12020 29.987 3.22e-82 293