Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4487 ATGGCACAAAAAGAAGAATCATCCAAAGTTGTTCAAACTTGCAACATTGAACCATTTCAAGAACCAACAAAACCTTCACAATCACCAACCTCACTTCCCCTCACTTTCTTTGATCTTCTATGGTTAAGATTTCCACCAGTTGAACGTCTTTTCTTCTATGAATTCACAAACTCACCCTCTTTTTTCTATGAAACTCTTCTTCCAAATCTCAAAAACTCACTCTCACTCACACTTCAACATTTTCTCCCTCTTGCTGGTAACATAGTTTGGCCTATTGATTCATCAAAACCAATCATAAACTATGTTCAAGGAGATTCTATTTCCTTCAATGTTGTTGAATCCAAAGAAAGTTTCAAAGAACTTTCTTCTAATCAATGTGAAGCTTCAAAAAGACATCACTTGATACCACCTTTGAAAACTTCACATGAAAAAGCTTCTTTGATTTCAATTCAAATCACTTTGTTTCCAAACAATGGTTTTTGCATTGGAATAACATCACATCATGCTGCTTTAGATGGAAAATCTTCCACCACTTTTATGAAATCATGGTCCTATATTGCATGTTCTAACTCGAACGTTGATTCATCTTCATCTTTATCTTTACCTGAAAATCTAACACCTTTTTTTGATAGATCATTGATAGAAGATCATCATAGTGGAATTAGTGAAGCATATATTGATGCTTTGATGAAACTTGGTGGACCAAATAATAAAAGTCTCAAGGTTTGGGATTTTCCCGGTGCAGCGAAAAATGATGCAATCAAAAGTTTATTTGAATTAACACCTTCAAATATTCAAAAGCTTAAAGAATATGCAAAGAATGAAATGAAAATGAATATTACAAATTTGTCAACTTTTTCAGTTTCATGTGCTTATGTGTTATCATGTTTAGCAAAAGCAGAACAACCAAAGGTTGAACAAGTGTTTTTCATGTTTAGTGTGGATTCTAGAGCTAGATTGGAGCCTTCAATTTCTCCTATGTATTTTGGAAATTGTGTTAGAGGACAAACGGTTGTGCTTGAGACAAAGAAATTAGTTGGAAAAGATGGATTTTTAAGTGCTTTAGAAGGGATGGATGAAACTTTGAATAGGGTGAAAAATGATGAAGTGTTGAATGGAGCTGAAAGTTGGTTAGCTAATATGTTTAAAATTGATAAGAATCTTAAAATTTACTCTATTGCTGGTTCACCAAGGTTTGAGGTTTATAGTATTGATTTTGGAGTTGGAAAGCCTAAGAAAGTTGAAACAACTTCAACTGATAAAACAGGAGCATTTTCTATTAGTGAAAATAGGAATAGCAATGGTGGAATTGAGATTGGTTTGGCTTTAAGTAAGGAAGTGATGGAAGCTTTTTCTACCATTTTTGTTCAAGGACTTGTATCATTTTAA 1389 0.3319 MAQKEESSKVVQTCNIEPFQEPTKPSQSPTSLPLTFFDLLWLRFPPVERLFFYEFTNSPSFFYETLLPNLKNSLSLTLQHFLPLAGNIVWPIDSSKPIINYVQGDSISFNVVESKESFKELSSNQCEASKRHHLIPPLKTSHEKASLISIQITLFPNNGFCIGITSHHAALDGKSSTTFMKSWSYIACSNSNVDSSSSLSLPENLTPFFDRSLIEDHHSGISEAYIDALMKLGGPNNKSLKVWDFPGAAKNDAIKSLFELTPSNIQKLKEYAKNEMKMNITNLSTFSVSCAYVLSCLAKAEQPKVEQVFFMFSVDSRARLEPSISPMYFGNCVRGQTVVLETKKLVGKDGFLSALEGMDETLNRVKNDEVLNGAESWLANMFKIDKNLKIYSIAGSPRFEVYSIDFGVGKPKKVETTSTDKTGAFSISENRNSNGGIEIGLALSKEVMEAFSTIFVQGLVSF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4487 462 PANTHER - 3 461 - -
Mal6g4487 462 Gene3D - 250 461 IPR023213 -
Mal6g4487 462 Pfam Transferase family 22 452 - -
Mal6g4487 462 Gene3D - 7 235 IPR023213 -
Mal6g4487 462 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 3 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4487 Mal-Chr6 128128354 128129742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4487 38 451 Monolignol Biosynthesis Gene Families AT5G48930 25.282 3.17e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4487 - - cam:101513090 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4487 6 128128354 128129742 Mal3g0409 3 15346062 15348249 PCT