Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4485 ATGGCTGCTCCTGAAATTAACTGGGACAGGCTAGATAAAACAAAATTCTATGTAGTGGGAGCTGGACTCTTTTCAGGTGTTACTGTGGCACTCTACCCTGTGTCTGTTGTGAAGACTAGGATGCAGGTTGCTTCAAACCATACTGCAGAGAGAAGTGCATTTTCTGTTGTGAAAGGGTTACTCAAGACAGATGGCGTTCGTGGTTTGTATAAAGGGTTTGGCACGGCCGTTACCGGAGCAATTCCTGCCAGAATCATATTTCTCACTGCCTTAGAGACCACAAAGGTGGCTTCCTTCAAGATGCTTGAACCATTTAAACTATCTGAAACTACCCAGGCTGCCATAGCAAATGGCATTGCTGGCATGACATCGTCGGTTTGTGCACAAGCTGTGTTTGTTCCAATTGACGTGATTAGCCAAAAGTTGATGGTGCAAGGGTACTCAGGCCATGCCCAGTATAGTGGGGGTTTGGATGTTGCTCGTAAGTTGATAAGGTCTGAAGGGATCAGGGGGTTATACAGAGGGTTTGGTCTATCTGTCATAACTTATTCACCATCTAGCGCTGTTTGGTGGGCAAGTTACGGCTCAAGTCAACGCTTCTTATGGAGATTCTTAGAAGATGATGTCAAATCTGAGAAAGGTACTCCTAGTCTGCCAAAGATTGTTTTAGTTCAAGCAGCTGGGGGAGTTATTGCTGGTGCTACTGCATCGTGCATTACAACTCCATTGGATACAATCAAGACTCGGTTACAGGTGATGGGACATGGAAAGAAAAGCTCTGTTAAACAAGTTGTTAAAGAATTGATCAGCGAGGATGGTTGGAAAGGAGTATATAGAGGATTAGGTCCAAGATTTGTCAGCATGTCAGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTGAAGCGCCTATGTGCAAAAGATGAAGAAGCAGCTGGTCAGCAATCTGGTATTGTTTCACATGATTAG 972 0.4424 MAAPEINWDRLDKTKFYVVGAGLFSGVTVALYPVSVVKTRMQVASNHTAERSAFSVVKGLLKTDGVRGLYKGFGTAVTGAIPARIIFLTALETTKVASFKMLEPFKLSETTQAAIANGIAGMTSSVCAQAVFVPIDVISQKLMVQGYSGHAQYSGGLDVARKLIRSEGIRGLYRGFGLSVITYSPSSAVWWASYGSSQRFLWRFLEDDVKSEKGTPSLPKIVLVQAAGGVIAGATASCITTPLDTIKTRLQVMGHGKKSSVKQVVKELISEDGWKGVYRGLGPRFVSMSAWGTSMILAYEYLKRLCAKDEEAAGQQSGIVSHD* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4485 323 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Mal6g4485 323 PRINTS Mitochondrial carrier protein signature 229 251 IPR002067 GO:0055085
Mal6g4485 323 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Mal6g4485 323 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 311 - -
Mal6g4485 323 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 311 - -
Mal6g4485 323 SUPERFAMILY Mitochondrial carrier 9 302 IPR023395 -
Mal6g4485 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Mal6g4485 323 Gene3D Mitochondrial carrier domain 18 319 IPR023395 -
Mal6g4485 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Mal6g4485 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 305 IPR018108 -
Mal6g4485 323 Pfam Mitochondrial carrier protein 114 202 IPR018108 -
Mal6g4485 323 Pfam Mitochondrial carrier protein 224 309 IPR018108 -
Mal6g4485 323 Pfam Mitochondrial carrier protein 19 97 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4485 Mal-Chr6 128107221 128111622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4485 6 310 Chloroplast and Mitochondria Gene Families AT5G15640 75.896 1.17e-169 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4485 K15121 - gmx:100819519 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4485 6 128107221 128111622 Mal6g4485 6 128107221 128111622 ECH
Mal6g4485 6 128107221 128111622 Mal3g0410 3 15364560 15370722 PCT